Gene Information

Name : UM146_16550 (UM146_16550)
Accession : YP_006112179.1
Strain : Escherichia coli UM146
Genome accession: NC_017632
Putative virulence/resistance : Virulence
Product : pseudopilin, cryptic, general secretion pathway
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 3420888 - 3421325 bp
Length : 438 bp
Strand : +
Note : COG2165 Type II secretory pathway, pseudopilin PulG

DNA sequence : 
ATGCGCGCAACGGATAAGCAACGCGGTTTTACATTACTGGAAATTATGGTGGTAATTGTCATCATTGGCGTACTCGCCAG
CCTGGTGGTTCCCAACCTGATGGGCAATAAAGAAAAGGCGGATAAACAAAAAGCCGTCAGCGATATTGTGGCGCTGGAAA
ACGCCCTGGATATGTACAAGCTCGACAATCATCGCTATCCAACCACAAATCAGGGGCTTGAATCCTTAGTAGAAGCGCCG
ACACTGCCACCGCTGGCCGCAAACTATAACAAGGAAGGTTATATCAAGCGTCTGCCTGCCGATCCCTGGGGCAATGATTA
TGTCCTCGTTAATCCTGGTGAGCATGGTGCATACGATCTGCTTTCAGCAGGACCCGATGGTGAAATGGGAACCGAGGACG
ACATCACCAACTGGGGTTTGAGCAAGAAGAAAAAGTAA

Protein sequence : 
MRATDKQRGFTLLEIMVVIVIIGVLASLVVPNLMGNKEKADKQKAVSDIVALENALDMYKLDNHRYPTTNQGLESLVEAP
TLPPLAANYNKEGYIKRLPADPWGNDYVLVNPGEHGAYDLLSAGPDGEMGTEDDITNWGLSKKKK

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
gspG YP_854404.1 type II secretion protein GspG Not tested PAI I APEC-O1 Protein 4e-39 65
gspG CAE85231.1 GspG, hypothetical type II secretion protein Not tested PAI V 536 Protein 3e-39 65

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
UM146_16550 YP_006112179.1 pseudopilin, cryptic, general secretion pathway VFG2050 Protein 1e-39 65
UM146_16550 YP_006112179.1 pseudopilin, cryptic, general secretion pathway VFG0180 Protein 1e-30 55
UM146_16550 YP_006112179.1 pseudopilin, cryptic, general secretion pathway VFG1871 Protein 2e-30 52