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Name : UM146_16535 (UM146_16535) Accession : YP_006112176.1 Strain : Escherichia coli UM146 Genome accession: NC_017632 Putative virulence/resistance : Virulence Product : general secretory pathway component, cryptic Function : - COG functional category : - COG ID : - EC number : - Position : 3416230 - 3418194 bp Length : 1965 bp Strand : + Note : COG1450 Type II secretory pathway, component PulD DNA sequence : ATGGACAGCGCAATGAAGGGACTCAATAAAATCACCTGCTGCTTGCTGGCAGCACTACTCATGCCTTGTGCAGGACACGC TGAGAACGAACAATACGGCGCTAACTTCAATAACGCCGATATCCGCCAGTTCGTGGAAATAGTGGGTCAGCATCTTGGCA AAACGATCCTGATCGACCCTTCGGTACAGGGAACCATTTCCGTACGCAGTAATGATACGTTTAGCCAACAGGAGTACTAC CAGTTCTTTTTAAGTATTCTTGATCTTTACGGTTATTCCGTGATCACACTGGACAATGGTTTTCTGAAAGTGGTGCGCTC AGCTAATGTAAAAACATCGCCAGGGATGATTGCTGACAGTTCTCGTCCAGGCGTAGGTGATGAGTTGGTCACCCGAATCG TACCGCTTGAGAACGTTCCTGCTCGTGACCTGGCTCCCCTGCTCCGCCAGATGATGGATGCGGGTAGCGTCGGTAATGTT GTGCATTATGAACCCTCCAACGTTCTTATTCTGACCGGTCGTGCCTCCACCATTAATAAACTGATTGAAGTCATAAAGCG CGTTGATGTCATCGGCACAGAGAAGCAGCAAATTATTCATCTGGAATATGCATCAGCGGAAGATCTCGCCGAGATTCTTA ATCAATTAATCAGCGAAAGCCACGGTAAAAGCCAGATGCCTGCCCTCCTTTCCGCGAAGATTGTGGCGGATAAGCGAACC AACTCTCTTATCATCAGCGGGCCGGAAAAAGCACGCCAGCGCATAACTTCATTACTGAAAAGCCTTGATGTAGAAGAGAG CGAGGAAGGAAATACCCGGGTCTATTACCTGAAATATGCTAAAGCCACGAATCTGGTGGAAGTGCTAACCGGTGTTTCCG AAAAGCTGAAAGATGAAAAAGGGAATTCGCGTAAGCCTTCTTCTACTTCTGCGATGGATAATGTGGCCATTACCGCCGAT GAACAGACCAACTCGTTGGTCATTACCGCTGACCAGTCCGTCCAGGAGAAACTCGCCACGGTAATTGCGCGTCTGGATAT TCGCCGTGCACAGGTGCTGGTTGAGGCAATCATCGTCGAAGTTCAGGATGGAAATGGACTCAACCTCGGCGTGCAATGGG CGAATAAAAACGTTGGCGCACAGCAATTTACCAATACGGGATTACCGGTTTTTAACGCTGCGCAAGGTGTAGCTGATTAT AAAAAGAATGGCGGGATCACCAGCGCGAATCCTGCCTGGGATATGTTTAGCGCCTACAATGGCATGGCTGCAGGCTTCTT CAATGGCGACTGGGGCGTATTGTTGACTGCGCTGGCCAGTAACAATAAAAATGACATCCTCGCCACCCCGAGCATCGTAA CGCTGGATAATAAACTCGCGTCCTTCAACGTTGGTCAGGATGTGCCGGTGCTATCCGGCTCTCAGACCACTTCTGGGGAT AACGTCTTTAATACTGTCGAACGCAAAACGGTGGGCACAAAACTCAAAGTCACTCCGCAGGTCAATGAAGGCGACGCGGT ACTGCTCGAAATAGAGCAGGAGGTTTCCAGCGTTGACTCTTCGTCTAATTCGACGCTCGGCCCGACATTTAACACCCGTA CTATTCAAAACGCCGTGCTGGTTAAAACCGGTGAAACGGTGGTCCTGGGCGGATTGCTGGATGATTTTTCTAAAGAGCAA GTGTCAAAGGTTCCTCTGCTTGGCGATATTCCTTTAGTGGGACAACTCTTCCGCTATACCTCGACCGAGCGCGCTAAACG CAACCTGATGGTATTTATCCGTCCGACGATTATCCGTGACGATGATGTTTATCGCTCACTGTCAAAAGAGAAATACACCC GCTACCGCCAGGAGCAACAGCTGCGAATCGACGGGAAATCAAAAGCGCTGATTGGCTCGGAAGATTTGCCGGTGCTGGAT GAGAACACGTTCAACAGTCACGCTCCTGCGCCATCGTCACGGTGA Protein sequence : MDSAMKGLNKITCCLLAALLMPCAGHAENEQYGANFNNADIRQFVEIVGQHLGKTILIDPSVQGTISVRSNDTFSQQEYY QFFLSILDLYGYSVITLDNGFLKVVRSANVKTSPGMIADSSRPGVGDELVTRIVPLENVPARDLAPLLRQMMDAGSVGNV VHYEPSNVLILTGRASTINKLIEVIKRVDVIGTEKQQIIHLEYASAEDLAEILNQLISESHGKSQMPALLSAKIVADKRT NSLIISGPEKARQRITSLLKSLDVEESEEGNTRVYYLKYAKATNLVEVLTGVSEKLKDEKGNSRKPSSTSAMDNVAITAD EQTNSLVITADQSVQEKLATVIARLDIRRAQVLVEAIIVEVQDGNGLNLGVQWANKNVGAQQFTNTGLPVFNAAQGVADY KKNGGITSANPAWDMFSAYNGMAAGFFNGDWGVLLTALASNNKNDILATPSIVTLDNKLASFNVGQDVPVLSGSQTTSGD NVFNTVERKTVGTKLKVTPQVNEGDAVLLEIEQEVSSVDSSSNSTLGPTFNTRTIQNAVLVKTGETVVLGGLLDDFSKEQ VSKVPLLGDIPLVGQLFRYTSTERAKRNLMVFIRPTIIRDDDVYRSLSKEKYTRYRQEQQLRIDGKSKALIGSEDLPVLD ENTFNSHAPAPSSR |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| gspD | CAE85234.1 | GspD, hypothetical type II secretion protein | Not tested | PAI V 536 | Protein | 6e-124 | 45 |
| gspD | YP_854407.1 | type II secretion protein GspD | Not tested | PAI I APEC-O1 | Protein | 4e-131 | 44 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| UM146_16535 | YP_006112176.1 | general secretory pathway component, cryptic | VFG2047 | Protein | 9e-122 | 45 |
