Gene Information

Name : UM146_01605 (UM146_01605)
Accession : YP_006109262.1
Strain : Escherichia coli UM146
Genome accession: NC_017632
Putative virulence/resistance : Virulence
Product : Polysialic acid transport ATP-binding protein
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 338023 - 338682 bp
Length : 660 bp
Strand : +
Note : COG1134 ABC-type polysaccharide/polyol phosphate transport system, ATPase component

DNA sequence : 
ATGATTAAGATTGAGAATTTGACGAAGTCTTATCGCACGCCCACTGGGCGGCATTATGTTTTTAAAAATTTGAATATTAT
TTTTCCTAAAGGCTATAACATTGCCCTGATTGGTCAAAATGGAGCCGGTAAATCAACTTTACTTCGGATAATTGGTGGTA
TAGATCGTCCTGATAGTGGGAACATTATTACAGAACATAAAATTTCATGGCCCGTTGGATTGGCTGGTGGATTTCAAGGA
AGTTTAACCGGTCGTGAAAATGTTAAATTTGTTGCCCGACTATATGCAAAACGCGATGAGTTAAATGAGAGGGTTGATTT
TGTTGAAGAGTTTTCCGAACTCGGAAAATATTTCGATATGCCCATTAAAACTTATTCTTCTGGCATGAGGTCAAGGTTAG
CTTTTGGATTAAGTATGGCTTTTAAATTCGACTATTATCTTATTGATGAAATCACTGCTGTTGGAGACGCAAAGTTTAAA
AAGAAATGTTCAGATATATTCGATAAAATAAGAGAAAAATCTCATTTAATAATGGTGTCACATAGTGAACGAGCTTTAAA
GGAGTATTGTGATGTTGCTATTTATCTTAACAAAGAGGGGCAAGGTAAATTTTATAAAAATGTTACGGAAGCCATTGCTG
ATTACAAAAAAGACCTATAG

Protein sequence : 
MIKIENLTKSYRTPTGRHYVFKNLNIIFPKGYNIALIGQNGAGKSTLLRIIGGIDRPDSGNIITEHKISWPVGLAGGFQG
SLTGRENVKFVARLYAKRDELNERVDFVEEFSELGKYFDMPIKTYSSGMRSRLAFGLSMAFKFDYYLIDEITAVGDAKFK
KKCSDIFDKIREKSHLIMVSHSERALKEYCDVAIYLNKEGQGKFYKNVTEAIADYKKDL

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
kpsT YP_854396.1 polysialic acid transport ATP-binding protein KpsT Not tested PAI I APEC-O1 Protein 4e-100 100
kpsT CAE85223.1 KpsT protein Virulence PAI V 536 Protein 1e-75 72
ctrD NP_273138.1 capsule polysaccharide export ATP-binding protein CtrD Not tested IHT-A Protein 9e-44 48

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
UM146_01605 YP_006109262.1 Polysialic acid transport ATP-binding protein VFG1449 Protein 1e-100 100
UM146_01605 YP_006109262.1 Polysialic acid transport ATP-binding protein VFG0696 Protein 1e-45 48
UM146_01605 YP_006109262.1 Polysialic acid transport ATP-binding protein VFG0258 Protein 3e-44 48
UM146_01605 YP_006109262.1 Polysialic acid transport ATP-binding protein VFG2563 Protein 3e-42 43