Gene Information

Name : UM146_01575 (UM146_01575)
Accession : YP_006109256.1
Strain : Escherichia coli UM146
Genome accession: NC_017632
Putative virulence/resistance : Virulence
Product : putative type II secretion protein (GspI-like)
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 332532 - 332903 bp
Length : 372 bp
Strand : +
Note : COG2165 Type II secretory pathway, pseudopilin PulG

DNA sequence :
ATGAAGCGCGGATTTACCTTGCTGGAAGTGATGCTCGCGCTGGCGATTTTTGCGCTGGCTGCCATGGCGGTGTTACAGAT
TGCCAGCGGTACGCTGAGTAATCAGCAAATCCTTGAGGAGAAAACGGTAGCGGGCTGGGTAGCTGAAAACCAGACTGCGC
TGCTTTACCTGATGACCCGTGAACAACGAGCGGTCAGGCACCAGGGCGAGAGTGATATGGCAGGAAGCCGCTGGTACTGG
CGAACGATCCCTCTGAATACCGGTAACGTGCTGCTCCAGGCGGTGGATATTGAAGTCAGTCTTCATGACGACTTTTCGCC
AGTGATTCAGTCAAGACGCGCCTGGTTTAGCGCCGTGGGAGGCCAACAGTGA

Protein sequence :
MKRGFTLLEVMLALAIFALAAMAVLQIASGTLSNQQILEEKTVAGWVAENQTALLYLMTREQRAVRHQGESDMAGSRWYW
RTIPLNTGNVLLQAVDIEVSLHDDFSPVIQSRRAWFSAVGGQQ

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
gspI YP_854402.1 type II secretion protein GspI Not tested PAI I APEC-O1 Protein 2e-42 100
gspI CAE85229.1 GspI, hypothetical type II secretion protein Not tested PAI V 536 Protein 4e-40 95

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
UM146_01575 YP_006109256.1 putative type II secretion protein (GspI-like) VFG2052 Protein 3e-40 91