Gene Information

Name : UM146_12350 (UM146_12350)
Accession : YP_006111351.1
Strain : Escherichia coli UM146
Genome accession: NC_017632
Putative virulence/resistance : Virulence
Product : F1C periplasmic chaperone
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 2541102 - 2541797 bp
Length : 696 bp
Strand : -
Note : COG3121 P pilus assembly protein, chaperone PapD

DNA sequence : 
ATGATGAAGCACATGCGTATATGGGCCGTTCTGGCATCATTTTTAGTCTTTTTTTATATTCCGCAGAGCTATGCCGGGGT
TGCTCTGGGTGCCACCCGTGTGATTTACCCTGAAGGGCAAAAACAGGTACAACTGGCGGTAACAAATAATGATGATAAAA
GTAGTTACCTTATTCAATCATGGATTGAAAATGTTGAAGGAAAAAAGGATGCCAGGTTTGTAATTACTCCTCCGTTATTT
TCCATGCAGGGAAAGAAAGAGAATACCCTGAGAATTATTGATGCCACAAACGGACAGATGCCGGAAGACAGGGAAAGTTT
GTTCTGGGTGAATGTCAAGGCCATCCCGGCCATGGATAAGGCGAAAACCGGCGAGAATTATCTGCAGTTTGCAATTGTCA
GCAGAATTAAACTGCTCTACCGTCCACAGGGACTGGTTATTCCGCCAGAACAGGCACCAGGTAAATTAGAGTTCACCCGT
GAAAACGGAGGGCTGACTCTGTTTAATCCGACGCCGTATTATCTGACAGTGACTGACTTAAAGGCCGGAAATAAAAGTCT
TGAAAACACCATGGTACCCCCACAGGGAAAGGTCACTGTTAATATCCCTGGAGGATACACCGGAGGAGATATTACTTATA
AAACAATTAACGATTATGGTGCTCTGACTGAACAGGTGAGGGGTGTGGTGAAGTAA

Protein sequence : 
MMKHMRIWAVLASFLVFFYIPQSYAGVALGATRVIYPEGQKQVQLAVTNNDDKSSYLIQSWIENVEGKKDARFVITPPLF
SMQGKKENTLRIIDATNGQMPEDRESLFWVNVKAIPAMDKAKTGENYLQFAIVSRIKLLYRPQGLVIPPEQAPGKLEFTR
ENGGLTLFNPTPYYLTVTDLKAGNKSLENTMVPPQGKVTVNIPGGYTGGDITYKTINDYGALTEQVRGVVK

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
sfaE CAC16952.2 SfaE protein Virulence PAI III 536 Protein 2e-106 99
fim2C AFH78430.1 putative fimbrial chaperone protein Virulence KpGI-5 Protein 1e-69 70

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
UM146_12350 YP_006111351.1 F1C periplasmic chaperone VFG1644 Protein 9e-107 99
UM146_12350 YP_006111351.1 F1C periplasmic chaperone VFG0911 Protein 2e-106 99
UM146_12350 YP_006111351.1 F1C periplasmic chaperone VFG0875 Protein 2e-70 65
UM146_12350 YP_006111351.1 F1C periplasmic chaperone VFG0445 Protein 4e-48 50
UM146_12350 YP_006111351.1 F1C periplasmic chaperone VFG0455 Protein 4e-38 41