Gene Information

Name : UM146_11305 (UM146_11305)
Accession : YP_006111142.1
Strain : Escherichia coli UM146
Genome accession: NC_017632
Putative virulence/resistance : Virulence
Product : iron transport protein, periplasmic-binding protein
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 2355654 - 2356568 bp
Length : 915 bp
Strand : +
Note : COG0803 ABC-type metal ion transport system, periplasmic component/surface adhesin

DNA sequence :
ATGCACTCGATAAAAAAAGTAACCATGCTCTTGGGGGGCCTCGCACTCACCTGCTCGATCGCATTTCAGGCAAGTGCAAC
TGAAAAATTCAAGGTCATTACAACATTTACCATCATCGCGGATATGGCCAAAAACGTGGCGGGAGATGCTGCAGAAGTCT
CATCCATAACCAAGCCTGGTGCAGAAATTCATGAGTATCAGCCTACCCCTGGCGATATTAAACGTGCGCAGGGGGCACAA
CTGATTCTCGCCAATGGTATGAATCTGGAATTGTGGTTCCAACGCTTTTACCAGCATCTCAATGGGGTTCCAGAAGTAAT
TGTCTCTTCGGGTGTGACGCCTGTAGGGATCACCGAAGGACCCTATGAGGGCAAACCTAACCCCCATGCATGGATGTCGC
CAGATAATGCTCTGATTTACGTCGATAATATTCGTGATGCGTTTATAAAATACGATCCGGCAAATGCACAAACCTACCAA
CGCAATGCCGATACTTATAAAGCCAAGATTACCCAAACCCTTGCCCCCCTGCGTAAGCAGATTACGGAACTCCCTGAGAA
TCAGCGATGGATGGTCACCAGTGAAGGGGCTTTTTCTTATCTCGCACGCGATTTGGGGCTAAAAGAGCTTTATCTGTGGC
CGATTAATGCCGATCAACAAGGAACACCGCAGCAGGTACGTAAGGTTGTTGATATAGTTAAGAAAAATCATATCCCGGCA
GTCTTTAGCGAGAGTACGATTTCCGATAAACCAGCGCGTCAGGTTGCGCGTGAAACCGGCGCACACTACGGCGGTGTGCT
CTATGTCGATTCCCTGAGCACAGAAAACGGCCCGGTACCGACGTATATCGACCTTCTTAAGGTTACTACCAGTACGCTGG
TACAGGGAATTAAAGCTGGGAAAAGGGAGAAATAA

Protein sequence :
MHSIKKVTMLLGGLALTCSIAFQASATEKFKVITTFTIIADMAKNVAGDAAEVSSITKPGAEIHEYQPTPGDIKRAQGAQ
LILANGMNLELWFQRFYQHLNGVPEVIVSSGVTPVGITEGPYEGKPNPHAWMSPDNALIYVDNIRDAFIKYDPANAQTYQ
RNADTYKAKITQTLAPLRKQITELPENQRWMVTSEGAFSYLARDLGLKELYLWPINADQQGTPQQVRKVVDIVKKNHIPA
VFSESTISDKPARQVARETGAHYGGVLYVDSLSTENGPVPTYIDLLKVTTSTLVQGIKAGKREK

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
sitA NP_806464.1 iron transporter periplasmic-binding protein Virulence SPI-1 Protein 5e-111 75
sitA NP_461782.1 periplasmic binding protein Virulence SPI-1 Protein 5e-111 75
sitA YP_217781.1 iron transporter: fur regulated Virulence SPI-1 Protein 2e-111 75
sitA AAD41065.1 SitA Virulence centisome 63 pathogenicity island Protein 3e-111 75
sitA NP_457255.1 Iron transport protein, periplasmic-binding protein Virulence SPI-1 Protein 5e-111 75

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
UM146_11305 YP_006111142.1 iron transport protein, periplasmic-binding protein BAC0349 Protein 2e-111 75
UM146_11305 YP_006111142.1 iron transport protein, periplasmic-binding protein BAC0439 Protein 3e-90 65

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
UM146_11305 YP_006111142.1 iron transport protein, periplasmic-binding protein VFG0525 Protein 2e-111 75