Gene Information

Name : UM146_09520 (UM146_09520)
Accession : YP_006110799.1
Strain : Escherichia coli UM146
Genome accession: NC_017632
Putative virulence/resistance : Virulence
Product : chaperone protein fimC precursor
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 1992091 - 1992810 bp
Length : 720 bp
Strand : +
Note : COG3121 P pilus assembly protein, chaperone PapD

DNA sequence : 
ATGCATCAGATGCAAACTACGCGTACCCCCTACTCTGTTTCCTTTATGGCGACAGTGTTACTTTTATTGCTCTTTGCTTG
CCATAGCACCATTGCCAACGCAGCTGTCGCACTTGGTGCGACGCGGGTAATTTATCCGGCAAACCAGAAACAGGTTTTAT
TGCCTGTCACGAATAATGATCCTGCCAGTGTCTATCTCATTCAGTCATGGATAGAAAATGCGGGTGACCAGAAAGATACC
CAGTTTGTCATTACCCCACCGCTTTTTTCCATGCAAGGTAAAAAAGAGAATACGCTTCGGATAATCAACGCCACTAATCA
TCAGTTACCAGGCGACCGTGAAAGCCTGTTCTGGGTTAATGTTAAAGCTATCCCTGCTATGGAAAAAGACCAGAAGAATG
AGAATACATTACAGCTGGCAATTATTAGCCGCATAAAAATGTTTTATCGCCCCACGCATCTGGCAATGGCACCTGAAGAA
GCGCCTGCAATGCTTCGGTTTCGTCGCAGCGGTAGCAAACTCACTCTTATTAATCCAACGCCCTACTTCATTACCGTAAC
AAATATGAAAGCAGGAAATAGCAATCTCCCAAACACCATGGTGCCGCCAAAAGGTGAAGTATCGGTGGATATCCCGCATG
CTGTAACCGGGGATATCAGTTTTCAGACAATCAATGATTACGGTGCATTAACTCCGCGTATTAAGGCAACCATGCAGTAA

Protein sequence : 
MHQMQTTRTPYSVSFMATVLLLLLFACHSTIANAAVALGATRVIYPANQKQVLLPVTNNDPASVYLIQSWIENAGDQKDT
QFVITPPLFSMQGKKENTLRIINATNHQLPGDRESLFWVNVKAIPAMEKDQKNENTLQLAIISRIKMFYRPTHLAMAPEE
APAMLRFRRSGSKLTLINPTPYFITVTNMKAGNSNLPNTMVPPKGEVSVDIPHAVTGDISFQTINDYGALTPRIKATMQ

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
fim2C AFH78430.1 putative fimbrial chaperone protein Virulence KpGI-5 Protein 8e-68 65
sfaE CAC16952.2 SfaE protein Virulence PAI III 536 Protein 9e-66 64

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
UM146_09520 YP_006110799.1 chaperone protein fimC precursor VFG0911 Protein 3e-66 64
UM146_09520 YP_006110799.1 chaperone protein fimC precursor VFG1644 Protein 5e-66 64
UM146_09520 YP_006110799.1 chaperone protein fimC precursor VFG0875 Protein 5e-70 59
UM146_09520 YP_006110799.1 chaperone protein fimC precursor VFG0445 Protein 6e-58 48