Gene Information

Name : UM146_07305 (UM146_07305)
Accession : YP_006110364.1
Strain : Escherichia coli UM146
Genome accession: NC_017632
Putative virulence/resistance : Virulence
Product : permease and ATP-binding protein of yersiniabactin-iron ABC transporter YbtQ
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 1567394 - 1569196 bp
Length : 1803 bp
Strand : +
Note : COG1132 ABC-type multidrug transport system, ATPase and permease components

DNA sequence :
ATGAAAGACAATAATCCTGCGGATAACCTGGCCTGGCGCGTCATCTGGCGCCAGCTTATCTCCAGCGTTGGCAGTCAGGC
CAGGATGCTGCGACGCAGTATGCTGGCGCTGTTGCTGGCGGCATTCATGCAGGGGATCGCCTTTGCCTGTCTTTATCCGA
TCATTGATGCGCTGTTACGGGGAGACGCGCCGCAACTTCTTAACTGGGCTATGGCCTTCAGCGTCGCCGCAATTGTGACG
CTGGTGCTACGCTGGTATGGCCTGGGCTTTGAATACCGTGGTCATCTGGCGCAGGCTACCCATGAGTTGCGCCTGCGACT
TGGCGAGCAGTTACGCCGCGTGCCGCTGGAGAAGCTCCAGCGCGGCAGGGCGGGTGAAATGAACGCCTTGCTGCTGGGCA
GCGTGGATGAAAACCTCAATTATGTTATTGCGATAGCCAATATTTTGCTGCTCACCATTGTCACGCCGCTGACGGCGTCG
CTGGCGACATTGTGGATAGACTGGCGGCTGGGGCTGGTGATGTTGCTGATCTTCCCTCTGCTGGTGCCGTTTTATTACTG
GCGCCGCCCGGCGATGCGGCGACAAATGCAGACGCTGGGGGAAGCGCACCAGCGTCTGAGCGGCGATATCGTTGAATTTG
CTCAGGGGATGATGGTATTGCGCACCTGCGGCAGCGATGCCGATAAAAGCCGGGCGCTGCTGGCGCATTTCAATGCGCTG
GAAAACTTACAGACCCGCACTCACCGTCAGGGCGCTGGCGCAACGATGCTGATCGCCAGCGTCGTGGAGTTGGGCCTACA
GGTGGTGGTGTTATCCGGGATCGTCTGGGTAGTGACGGGCACTCTGAACCTCGCCTTTTTGATTGCCGCCGTCGCGATGA
TTATGCGCTTCGCAGAACCGATGGCGATGTTTATCAGCTACACCTCGGTTGTGGAACTGATCGCCAGCGCCCTGCAACGG
ATTGAGCAGTTTATGGCGATAGCACCGCTTCCCGTCGCAGAGCAAAGCGAGATGCCGGAACGTTACGATATCCGCTTTGA
CAACGTCAGCTATCGCTACGAAGAAGGTGACGGCCACGCGCTTAATCATGTTTCTTTGACGTTCCCGGCAGCCAGTATGA
GCGCGCTGGTGGGTGCCTCCGGCGCAGGCAAAACTACGGTCACCAAACTGTTAATGCGCTATGCCGATCCGCAGCAAGGG
CAGATTTCTATTGGCGGCGTCGATATTCGCCGCCTGACGCCGGAACAGCTCAATAGCCTGATTTCTGTTGTTTTCCAGGA
TGTCTGGCTGTTTGATGACACGCTGCTGGCGAATATCCGTATCGCGCGCCCACAGGCGACGCGGCAGGAGGTAGAAGAGG
CCGCCCGCGCGGCGCAGTGCCTTGAGTTTATTTCCCGTCTTCCGCAAGGCTGGCTGACGCCAATGGGAGAGATGGGCGGC
CAGCTATCGGGCGGCGAGCGCCAGCGGATTTCCATTGCCAGAGCGTTATTGAAAAACGCGCCGGTCGTCATTCTCGATGA
ACCGACTGCCGCGCTGGATATTGAAAGCGAGCTGGCGGTGCAAAAAGCGATCGATAACCTGGTTCACAACCGGACGGTGA
TTATCATCGCTCACCGTTTATCCACCATCGCCGGGGCCGGAAACATTCTGGTGATGGAAGAGGGACAGGTGGTTGAGCAG
GGTACTCATGCGCAATTGCTCTCACATCATGGACGTTATCAGGCGCTGTGGCAGGCGCAAATGGCCGCGCGCGTGTGGCG
CGACGACGGGGGTTCCGCGTCTGGAGAGTGGGTGCATGAGTGA

Protein sequence :
MKDNNPADNLAWRVIWRQLISSVGSQARMLRRSMLALLLAAFMQGIAFACLYPIIDALLRGDAPQLLNWAMAFSVAAIVT
LVLRWYGLGFEYRGHLAQATHELRLRLGEQLRRVPLEKLQRGRAGEMNALLLGSVDENLNYVIAIANILLLTIVTPLTAS
LATLWIDWRLGLVMLLIFPLLVPFYYWRRPAMRRQMQTLGEAHQRLSGDIVEFAQGMMVLRTCGSDADKSRALLAHFNAL
ENLQTRTHRQGAGATMLIASVVELGLQVVVLSGIVWVVTGTLNLAFLIAAVAMIMRFAEPMAMFISYTSVVELIASALQR
IEQFMAIAPLPVAEQSEMPERYDIRFDNVSYRYEEGDGHALNHVSLTFPAASMSALVGASGAGKTTVTKLLMRYADPQQG
QISIGGVDIRRLTPEQLNSLISVVFQDVWLFDDTLLANIRIARPQATRQEVEEAARAAQCLEFISRLPQGWLTPMGEMGG
QLSGGERQRISIARALLKNAPVVILDEPTAALDIESELAVQKAIDNLVHNRTVIIIAHRLSTIAGAGNILVMEEGQVVEQ
GTHAQLLSHHGRYQALWQAQMAARVWRDDGGSASGEWVHE

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
irp7 YP_001006812.1 inner membrane ABC-transporter YbtQ Not tested HPI Protein 0.0 99
irp7 YP_002346905.1 ABC transporter permease Not tested HPI Protein 0.0 99
ybtQ NP_669703.1 permease and ATP-binding protein of yersiniabactin-iron ABC transporter Virulence HPI Protein 0.0 99
ybtQ NP_993010.1 ABC transporter permease Virulence HPI Protein 0.0 99
ybtQ YP_070127.1 ABC transporter permease Virulence HPI Protein 0.0 99
ybtQ CAA21387.1 - Virulence HPI Protein 0.0 99
irp7 CAB46572.1 inner membrane ABC-transporter, Irp7 Virulence HPI Protein 0.0 99
APECO1_1055 YP_853072.1 ABC transporter Not tested PAI IV APEC-O1 Protein 0.0 99

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
UM146_07305 YP_006110364.1 permease and ATP-binding protein of yersiniabactin-iron ABC transporter YbtQ BAC0433 Protein 0.0 99