Gene Information

Name : ECABU_c49270 (ECABU_c49270)
Accession : YP_006108836.1
Strain : Escherichia coli ABU 83972
Genome accession: NC_017631
Putative virulence/resistance : Virulence
Product : hypothetical protein
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 5016056 - 5016874 bp
Length : 819 bp
Strand : +
Note : -

DNA sequence :
ATGCAATTAGCCAGTCGTTTTGGTCATGTAAATCAGATCCGTCGGGAGCGCCCACTGACACGCGAAGAACTGATGTACCA
CGTCCCGAGTATTTTTGGAGAAGACCGGCACACCTCCCGCAGTGAACGGTATGCGTACATTCCCACCATCACCGTCCTGG
AAAATCTGCAGCGGGAAGGCTTTCAGCCGTTCTTCGCCTGCCAGACCCGTGTGCGCGACCAGAGCCGCCGGGAATATACC
AAACATATGCTGCGTCTGCGGCGGGCCGGACAGATAACCGGTCAGCATGTGCCTGAAATTATTCTGCTCAACTCCCATGA
CGGATCATCCAGCTACCAGATGTTACCCGGATATTTTCGTGCCATTTGTACCAATGGCCTGGTCTGCGGTCAGTCGCTGG
GAGAAGTCCGGGTGCCACACCGGGGAAACGTGGTGGACAGGGTCATAGAAGGTGCTTACGAAGTGGTGGGCGTGTTTGAC
CGGATTGAGGAAAAGCGTGATGCCATGCAGTCGCTGGTCCTGCCGCCACCGGCACGCCAGGCGCTGGCACAGGCGGCGCT
GACTTACCGTTATGGTGATGAACATCAGCCCGTCACCACTACCGACATTCTGACGCCACGACGCCGGGAGGATTACGGTA
AGGACCTGTGGAGTGCTTATCAGACCATCCAGGAAAATATGCTGAAAGGCGGGATTTCCGGTCGCAGTGCCAGAGGAAAA
CGTATCCATACCCGGGCCATTCACAGCATCGATACCGACATTAAGCTCAACCGGGCGTTGTGGGTGATGGCAGAAACGCT
GCTGGAGAGCATGCGCTGA

Protein sequence :
MQLASRFGHVNQIRRERPLTREELMYHVPSIFGEDRHTSRSERYAYIPTITVLENLQREGFQPFFACQTRVRDQSRREYT
KHMLRLRRAGQITGQHVPEIILLNSHDGSSSYQMLPGYFRAICTNGLVCGQSLGEVRVPHRGNVVDRVIEGAYEVVGVFD
RIEEKRDAMQSLVLPPPARQALAQAALTYRYGDEHQPVTTTDILTPRRREDYGKDLWSAYQTIQENMLKGGISGRSARGK
RIHTRAIHSIDTDIKLNRALWVMAETLLESMR

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
z1215 CAD33785.1 Z1215 protein Not tested PAI I 536 Protein 3e-120 100
unnamed CAD42096.1 hypothetical protein Not tested PAI II 536 Protein 1e-118 99
yafZ CAE85199.1 YafZ protein Not tested PAI V 536 Protein 2e-118 98
Z1215 NP_286750.1 hypothetical protein Not tested TAI Protein 7e-115 96
Z1655 NP_287158.1 hypothetical protein Not tested TAI Protein 7e-115 96
unnamed CAD66201.1 hypothetical protein Not tested PAI III 536 Protein 1e-109 92
c5156 NP_757004.1 hypothetical protein Not tested PAI II CFT073 Protein 2e-110 91
yafZ YP_854321.1 hypothetical protein Not tested PAI I APEC-O1 Protein 1e-110 91
ORF_47 AAZ04456.1 conserved hypothetical protein Not tested PAI I APEC-O1 Protein 9e-111 91
ECO103_3587 YP_003223444.1 hypothetical protein Not tested LEE Protein 8e-110 91
unnamed CAI43843.1 hypothetical protein Not tested LEE Protein 8e-110 90
aec71 AAW51754.1 Aec71 Not tested AGI-3 Protein 8e-110 90
yafZ ADD91704.1 YafZ Not tested PAI-I AL862 Protein 8e-110 90
S3199 NP_838482.1 hypothetical protein Not tested SHI-1 Protein 2e-110 89
SF2994 NP_708768.1 hypothetical protein Not tested SHI-1 Protein 2e-110 89
ORF SG86 AAN62307.1 conserved hypothetical protein Not tested PAGI-3(SG) Protein 4e-73 55
ORF C80 AAN62174.1 conserved hypothetical protein; associated with oriT region on plasmids Not tested PAGI-2(C) Protein 3e-72 52

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
ECABU_c49270 YP_006108836.1 hypothetical protein VFG1526 Protein 2e-120 100
ECABU_c49270 YP_006108836.1 hypothetical protein VFG1615 Protein 6e-119 99
ECABU_c49270 YP_006108836.1 hypothetical protein VFG1676 Protein 8e-110 92
ECABU_c49270 YP_006108836.1 hypothetical protein VFG0658 Protein 7e-111 89