Gene Information

Name : ECABU_c49240 (ECABU_c49240)
Accession : YP_006108833.1
Strain : Escherichia coli ABU 83972
Genome accession: NC_017631
Putative virulence/resistance : Virulence
Product : putative DNA-binding transcriptional regulator
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 5014219 - 5014899 bp
Length : 681 bp
Strand : +
Note : -

DNA sequence : 
ATGTCTGATAATCGTTCCCGGCATGATCGCCTGGCGGTTCGCTTATCACTCATTATCAGCCGACTGATGGCCGGAGAATC
TCTGTCACTAAAAACACTGTCAGATGAATTTGGCGTTACAGAACGTACTTTACAGCGCGATTTTCATCAGCGTCTGGTTC
ACCTGGACTTAGAGTACAGAAATGGCCGGTACAGTCTCAGACGGCAGAGCAACCCGGGCGCGATCCCTGAAATGCTTTCA
TTTATACAGAATACGGGGATCGCACGGATACTTCCGCTCCGGAACGGACGACTGATAACCTGTCTTACCGACAACCAGGA
GCCCTCTCCCTGCCTTATCTGGCTACCGGCGCCGGATATCACTGCAACACTCCCAGAGTGTTTCTCGCAACTCATCCTGG
CAATAAGACAGTGCATCCACATCTCGCTGGTGACTGAGCGATGGTATCCGTCACTGGAACCCTGCCGGCTCATTTATTAC
AGCGGAAGCTGGTATCTGATCGCGTTACAGAAGGGAAAACTGCGGGTCTTTCCCCTGGCAGACATCAAATCGGTCAGCCT
GACATCAGAACGGTTTGAACGGAGAGACCACATCCACAGTCTGGTCGCTGAAGAGCGTTTTATCTCCGCTCTGCCACATT
TCCCTTTCATCCATAAACTTATCAACACCTTTAACCTGTGA

Protein sequence : 
MSDNRSRHDRLAVRLSLIISRLMAGESLSLKTLSDEFGVTERTLQRDFHQRLVHLDLEYRNGRYSLRRQSNPGAIPEMLS
FIQNTGIARILPLRNGRLITCLTDNQEPSPCLIWLPAPDITATLPECFSQLILAIRQCIHISLVTERWYPSLEPCRLIYY
SGSWYLIALQKGKLRVFPLADIKSVSLTSERFERRDHIHSLVAEERFISALPHFPFIHKLINTFNL

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
unnamed CAD42094.1 hypothetical protein Not tested PAI II 536 Protein 4e-102 98
APECO1_3492 YP_854319.1 transcriptional regulator Not tested PAI I APEC-O1 Protein 1e-101 97
unnamed CAD33782.1 hypothetical protein Not tested PAI I 536 Protein 1e-101 97
yfjR AAZ04453.1 transcriptional regulator Not tested PAI I APEC-O1 Protein 7e-102 97
c5160 NP_757008.1 transcriptional regulator YfjR Not tested PAI II CFT073 Protein 3e-101 97

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
ECABU_c49240 YP_006108833.1 putative DNA-binding transcriptional regulator VFG1613 Protein 2e-102 98
ECABU_c49240 YP_006108833.1 putative DNA-binding transcriptional regulator VFG1523 Protein 8e-102 97