Gene Information

Name : ECABU_c49210 (ECABU_c49210)
Accession : YP_006108831.1
Strain : Escherichia coli ABU 83972
Genome accession: NC_017631
Putative virulence/resistance : Virulence
Product : putative GTPase
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 5013132 - 5014016 bp
Length : 885 bp
Strand : +
Note : -

DNA sequence : 
ATGTCATTCAGCCATTCTTCCCTCTCCGCGCAAGTGAAATCACATCTGACGTTTCTTCCTGAAGAAATTCGCCAGAAAAT
CCTTGAACATCTCCGCAGCGTTATTCATTACGAACCCGTGATTGGCATTATGGGTAAATCCGGCACCGGCAAAAGCAGCC
TGTGTAATGCTATTTTTCAGTCCCGTATCTGCGCCACGCATCCCCTGAACGGCTGCACCCGTCAGGCTCATCACCTTACC
CTTCAGTTAGGTGAACGCAGAATGACGCTGGTCGATCTGCCCGGCATTGGTGAGACACTGCAACATGATCAGGAATACCG
GGAGCTTTACCGTCAGTTACTGCCGGAACTGGATCTGATTATCTGGATCCTGCGGGCTGATGAACGTGCGTATGCCGCCG
ACATTACCATGCATCAGTTTTTACTGAATGAAGGCGCAGATCCCTCGCGTTTTCTGTTTGTTCTCAGCCATGCCGATCGC
GTGTTTCCTGCCGGCGAGTGGAACGACACAGAAAAATGCCCGTCCCGTCAGCAGGAACTCTCACTGGCAACAGTAACAGC
CCGGGTGGCAACCCTGTTCCCTTCATCACTTCCGGTACTCCCCGTTGCCGCACCTGTCGGCTGGAATCTTCCGGCACTGG
TGTCGCTGATGATCCACGCACTGCCACCACAGGCAACCAGCGCAGTTTATTCACATATCCGGGGGGAAAACCGCTCTGAA
CAGGCCCGGAAACACGCACAACAAACTTTTGGTGACGCCATCGGGAAAAGCTTTGACGCTGCCGTTGCCCGATTCAGTTT
TCCGGCCTGGATGTTACAGCTTCTGCGTAAAGCCCGGGACCGCATTATCCACCTGCTGATCACACTGTGGGAGCGTCTGT
TCTGA

Protein sequence : 
MSFSHSSLSAQVKSHLTFLPEEIRQKILEHLRSVIHYEPVIGIMGKSGTGKSSLCNAIFQSRICATHPLNGCTRQAHHLT
LQLGERRMTLVDLPGIGETLQHDQEYRELYRQLLPELDLIIWILRADERAYAADITMHQFLLNEGADPSRFLFVLSHADR
VFPAGEWNDTEKCPSRQQELSLATVTARVATLFPSSLPVLPVAAPVGWNLPALVSLMIHALPPQATSAVYSHIRGENRSE
QARKHAQQTFGDAIGKSFDAAVARFSFPAWMLQLLRKARDRIIHLLITLWERLF

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
c5162 NP_757010.1 hypothetical protein Not tested PAI II CFT073 Protein 1e-131 95
unnamed CAD42093.1 hypothetical protein Not tested PAI II 536 Protein 7e-131 95
unnamed AAL67395.1 unknown Not tested PAI II CFT073 Protein 7e-132 95
ORF_43 AAZ04452.1 conserved hypothetical protein Not tested PAI I APEC-O1 Protein 7e-132 95
APECO1_3493 YP_854318.1 hypothetical protein Not tested PAI I APEC-O1 Protein 1e-131 95
unnamed CAD33781.1 hypothetical protein Not tested PAI I 536 Protein 1e-130 94

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
ECABU_c49210 YP_006108831.1 putative GTPase VFG1612 Protein 4e-131 95
ECABU_c49210 YP_006108831.1 putative GTPase VFG1522 Protein 7e-131 94