Gene Information

Name : ECABU_c49080 (ECABU_c49080)
Accession : YP_006108817.1
Strain : Escherichia coli ABU 83972
Genome accession: NC_017631
Putative virulence/resistance : Unknown
Product : putative transposase-related protein
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 5001929 - 5002234 bp
Length : 306 bp
Strand : +
Note : -

DNA sequence :
GTGACTCACAAGACAAAACAGTTTCAACCAGTAAAAAAACGTAAACAGCATTCGCCTGAATTTCTCAGTGAAGCCCTGAA
ACTTGCTGAACGCATCGGTGTTGCTGCCGCAGCCCGTGAACTCAGCCTGTATGAATCACAGCTCTATGCGTGGCGCAGCA
AACTGCAGCAACAAATGAGTTCGTCAGAGCGTGAAAGTGAACTGGCCGCTGAAAATGCCCGCCTGAAGCGGCAACTGGCG
GAGCAGGCAGAGGAACTGGCTATCCTCCAAAAGGCCGCGACATACTTTGCGAATCGTCTGAAATGA

Protein sequence :
MTHKTKQFQPVKKRKQHSPEFLSEALKLAERIGVAAAARELSLYESQLYAWRSKLQQQMSSSERESELAAENARLKRQLA
EQAEELAILQKAATYFANRLK

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
S4064 NP_839234.1 IS3 orfA Not tested SHI-2 Protein 4e-20 92
SF3703 NP_709442.1 IS3 ORF1 Not tested SHI-2 Protein 4e-20 92
unnamed AAT48700.1 transposon-related Not tested PAI II 4787 Protein 2e-19 92
yis1_SHISO CAD66178.1 hypothetical protein of insertion element IS1 Not tested PAI III 536 Protein 2e-19 92
unnamed AAL57580.1 transposase 2 Not tested LEE Protein 2e-21 83
ECO111_3733 YP_003236069.1 putative IS3 transposase InsE Not tested LEE Protein 3e-21 83
unnamed AAC28568.1 YIS1_SHISO Not tested LEE Protein 2e-21 83
unnamed AAL57518.1 transposase 2 Not tested LEE Protein 2e-21 83

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
ECABU_c49080 YP_006108817.1 putative transposase-related protein VFG0603 Protein 1e-20 92
ECABU_c49080 YP_006108817.1 putative transposase-related protein VFG1632 Protein 7e-20 92