Gene Information

Name : hlyC (ECABU_c48880)
Accession : YP_006108797.1
Strain : Escherichia coli ABU 83972
Genome accession: NC_017631
Putative virulence/resistance : Virulence
Product : hemolysin HlyC
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 4983864 - 4984376 bp
Length : 513 bp
Strand : -
Note : -

DNA sequence : 
ATGAATATGAACAATCCATTAGAGGTTCTTGGGCATGTATCTTGGCTCTGGGCCAGTTCCCCATTACACAGAAACTGGCC
AGTCTCTTTGTTTGCAATAAATGTATTACCTGCAATACGGGCTAACCAATATGCTTTATTAACCCGGGATAATTACCCTG
TTGCATATTGTAGTTGGGCTAATTTAAGTTTAGAAAATGAAATTAAATATCTTAATGATGTTACCTCATTAGTCGCAGAA
GACTGGACTTCAGGTGATCGTAAATGGTTCATTGACTGGATTGCTCCTTTCGGGGATAACGGTGCCCTGTACAAATATAT
GCGAAAAAAATTCCCTGATGAACTATTCCGAGCCATCAGGGTGGATCCCAAAACTCATGTTGGTAAAGTATCAGAATTTC
ACGGAGGTAAAATTGATAAACAGTTAGCGAATAAAATTTTTAAACAATATCACCACGAGTTAATAACTGAAGTAAAAAAC
AAGATAGATTTCAATTTTTCATTAACAGGTTAA

Protein sequence : 
MNMNNPLEVLGHVSWLWASSPLHRNWPVSLFAINVLPAIRANQYALLTRDNYPVAYCSWANLSLENEIKYLNDVTSLVAE
DWTSGDRKWFIDWIAPFGDNGALYKYMRKKFPDELFRAIRVDPKTHVGKVSEFHGGKIDKQLANKIFKQYHHELITEVKN
KIDFNFSLTG

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
hlyC CAD42040.1 HlyC protein Virulence PAI II 536 Protein 2e-75 99
hlyC CAD33758.1 hemolysin C Virulence PAI I 536 Protein 7e-75 99
hlyC NP_755444.1 hemolysin C Virulence PAI I CFT073 Protein 4e-75 99

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
hlyC YP_006108797.1 hemolysin HlyC VFG1559 Protein 7e-76 99
hlyC YP_006108797.1 hemolysin HlyC VFG1499 Protein 3e-75 99
hlyC YP_006108797.1 hemolysin HlyC VFG0905 Protein 1e-75 99
hlyC YP_006108797.1 hemolysin HlyC VFG0842 Protein 6e-57 68