Gene Information

Name : ECABU_c48800 (ECABU_c48800)
Accession : YP_006108789.1
Strain : Escherichia coli ABU 83972
Genome accession: NC_017631
Putative virulence/resistance : Unknown
Product : putative transposase-related protein
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 4971918 - 4972217 bp
Length : 300 bp
Strand : -
Note : -

DNA sequence :
ATGACAAAACCAGTATCAATCAGCAAGAAGCCCCGTAAACAACATACGCCTGAATTTCGTAACGAAGCCCTGAAACTCGC
TGAACGCATCGGTGTGGCCGCCGCAGCCCGTGAACTCAGCCTGTATGAATCTCAGCTTTATGCCTGGCGCAGTAAACAGC
AGCAACAAATGAGTTCGTCAGAGCGCGAAAGCGAACTGGCCGCTGAAAATGTCCGCCTTAAACGACAACTGGCGGAGCAG
GCTGAGGAACTGGCCATCCTCCAAAAGGCCGCGACATCCTTCGCGAAGCGCCTGAAATGA

Protein sequence :
MTKPVSISKKPRKQHTPEFRNEALKLAERIGVAAAARELSLYESQLYAWRSKQQQQMSSSERESELAAENVRLKRQLAEQ
AEELAILQKAATSFAKRLK

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
S4064 NP_839234.1 IS3 orfA Not tested SHI-2 Protein 4e-28 98
SF3703 NP_709442.1 IS3 ORF1 Not tested SHI-2 Protein 4e-28 98
unnamed AAT48700.1 transposon-related Not tested PAI II 4787 Protein 2e-27 98
yis1_SHISO CAD66178.1 hypothetical protein of insertion element IS1 Not tested PAI III 536 Protein 2e-27 98
unnamed AAC28568.1 YIS1_SHISO Not tested LEE Protein 6e-27 82
unnamed AAL57518.1 transposase 2 Not tested LEE Protein 6e-27 82
unnamed AAL57580.1 transposase 2 Not tested LEE Protein 6e-27 82
ECO111_3733 YP_003236069.1 putative IS3 transposase InsE Not tested LEE Protein 9e-27 82

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
ECABU_c48800 YP_006108789.1 putative transposase-related protein VFG1632 Protein 7e-28 98
ECABU_c48800 YP_006108789.1 putative transposase-related protein VFG0603 Protein 1e-28 98