Gene Information

Name : ECABU_c48770 (ECABU_c48770)
Accession : YP_006108786.1
Strain : Escherichia coli ABU 83972
Genome accession: NC_017631
Putative virulence/resistance : Unknown
Product : putative transposase
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 4970248 - 4970598 bp
Length : 351 bp
Strand : -
Note : -

DNA sequence :
ATGATCTCGCTCCCATCAGACACTCGAATCTGGCTGGTTGCCGGCGTTACTGATATGCGTAAATCCTTCAACGGTCTGGG
TGAACAGGTACAACATGTGCTGGATGAGAACCCCTTCTCCGGTCACCTGTTTATCTTTCGCGGCCGACGGGGTGACACGA
TTAAAATCCTGTGGGCTGATGCTGATGGTCTGTGCCTGTTCACCAAACGTCTGGAGGAAGGCCAGTTTATCTGGCCTGCG
GTGCGTGACGGTAAGGTATCCATTACCCGCTCGCAGCTGGCAATGCTCCTCGATAAACTGGACTGGCGTCAACCCAAAAC
ATCCCGCCTTAATGCACTGACAATGTTGTAA

Protein sequence :
MISLPSDTRIWLVAGVTDMRKSFNGLGEQVQHVLDENPFSGHLFIFRGRRGDTIKILWADADGLCLFTKRLEEGQFIWPA
VRDGKVSITRSQLAMLLDKLDWRQPKTSRLNALTML

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
Z1160 NP_286695.1 hypothetical protein Not tested TAI Protein 1e-49 99
Z1599 NP_287103.1 hypothetical protein Not tested TAI Protein 1e-49 99
ECUMN_3364 YP_002414037.1 putative transposase ORF2, IS66 family Not tested Not named Protein 2e-49 97
ECO103_3567 YP_003223430.1 hypothetical protein Not tested LEE Protein 2e-48 96
Z4338 NP_289563.1 hypothetical protein Not tested OI-122 Protein 2e-48 96
aec52 AAW51735.1 Aec52 Not tested AGI-3 Protein 2e-38 69
unnamed ADD91739.1 hypothetical protein Not tested PAI-I AL862 Protein 2e-38 69
pB171ORF50 CAD66190.1 ORF50 protein of pB171 Not tested PAI III 536 Protein 5e-38 68
unnamed AAL08461.1 unknown Not tested SRL Protein 4e-35 65
ECUMN_3327 YP_002414007.1 putative transposase ORF2, IS66 family Not tested Not named Protein 1e-34 64
c3578 NP_755453.1 hypothetical protein Not tested PAI I CFT073 Protein 8e-35 64
Z4336 NP_289561.1 hypothetical protein Not tested OI-122 Protein 8e-35 64
unnamed AAC31493.1 L0014 Not tested LEE Protein 6e-35 64
Z5097 NP_290248.1 prophage-associated protein Not tested LEE Protein 8e-35 64
hp4 AAC61716.1 Hp4 Not tested PAI I CFT073 Protein 6e-35 64
ECs4546 NP_312573.1 hypothetical protein Not tested LEE Protein 8e-35 64
unnamed AAL99258.1 unknown Not tested LEE Protein 6e-35 64
unnamed ACU09438.1 IS66 family element orf2 Not tested LEE Protein 6e-35 64
c3561 NP_755436.1 hypothetical protein Not tested PAI I CFT073 Protein 1e-34 64
Z1132 NP_286667.1 hypothetical protein Not tested TAI Protein 5e-34 63
Z1571 NP_287075.1 hypothetical protein Not tested TAI Protein 5e-34 63
l0014 CAD33776.1 L0014 protein Not tested PAI I 536 Protein 2e-26 63
ECO103_3553 YP_003223420.1 hypothetical protein Not tested LEE Protein 1e-34 61
Z4316 NP_289542.1 hypothetical protein Not tested OI-122 Protein 1e-34 61
BCAM0247 YP_002232879.1 putative transposase Not tested BcenGI11 Protein 2e-28 59

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
ECABU_c48770 YP_006108786.1 putative transposase VFG1737 Protein 5e-50 97
ECABU_c48770 YP_006108786.1 putative transposase VFG1665 Protein 2e-38 68
ECABU_c48770 YP_006108786.1 putative transposase VFG1052 Protein 2e-35 65
ECABU_c48770 YP_006108786.1 putative transposase VFG1698 Protein 3e-35 64
ECABU_c48770 YP_006108786.1 putative transposase VFG1709 Protein 2e-35 64
ECABU_c48770 YP_006108786.1 putative transposase VFG0792 Protein 2e-35 64
ECABU_c48770 YP_006108786.1 putative transposase VFG1517 Protein 9e-27 63