Gene Information

Name : ECABU_c48760 (ECABU_c48760)
Accession : YP_006108785.1
Strain : Escherichia coli ABU 83972
Genome accession: NC_017631
Putative virulence/resistance : Unknown
Product : putative transposase
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 4968682 - 4970217 bp
Length : 1536 bp
Strand : -
Note : -

DNA sequence :
ATGAGTCGGAAATACCTCATTCGTATCACTGAGCTGGAAAGGCTACTCTCTGAGCAGGCTGAAGCCCTCCGTCAGAAAGA
TCAGCAACTGAGTCTGGTTGAAGAGACGGAGGCCTTCCTGCGCTCTGCACTGGCACGTGCCGAAGAAAAGATCGAAGAGG
AGGAGCGGGAAACAGAACATCTGAGGGCCCAGATAGAAAAACTGCGCCGGATGCTGTTCGGTACCCGTTCTGAAAAACTG
CAGCGTGAGGTTGAACAGGCTGAGGCCCAACTGAAACAACGCGAACAGGAAAGCGATCGTTACAGTGGGCGTGAGGATGA
CCCGCAGGTTCCCCGCCAGTTGCGACAGTCACGTCATCGTCGTCCGTTACCAGCACATCTTCCCCGTGAAATACACCGCC
TGGAGCCTGAAGAAAGTTGTTGCCCGGAGTGTGGCAGTGAGCTGGATTATCTGGGTGAAGTCAGTGCTGAGCAGCTGGAA
CTGGTGAGTAGCGCCCTGAAAGTGATCCGCACTGTTCGGGTAAAAAAAGCCTGTACAAAATGTGACTGTATAGTTGAAGC
GCCAGCGCCGTCCCGCCCGATAGAGCGCGGCATCGCGGGCTCCGGATTACTTGCCCGCGTGTTAGCGGGACAATACTGCG
AACACCTGCCACTGTATCGTCAGAGTGAAATCTTTGCCCGACAGGGTGCCGAACTGAGCCGTGCATTACTCTCCAACTGG
GTTGACGCGTGCTGCCAGTTAATGACTCCGCTGAATGATGCCCTGTACCGTTACGTGATGAACACCCGCAAGGTTCACAC
TGACGACATACCAGTAAAAGTGCTGGCACCGGGCAGAAAAAAGGCAAAAACAGGACGCATCTGGACGTATGTCCGGGATG
ACCGGAATGCGGGCTCATCAGACAGGCAGGGAAAACATCCGGTACAACACCTTCGTCCCTTCCGGGGTATCCTGCAGGCG
GATGCATTCAGCGGTTACGATCGGCTGTTCAGTGCCGAACGTGAAGGTGGTGCACTGACAGAAGTTGCGTGCTGGGCCCA
TGCCCGGCGAAAAATCCACGATGTATACATCAGCAGCAAAAGTACGACGGCAGAAGAAGCTCTGAAGCGCATCAGTGAAC
TGTACGCCATTGAGGATGAAATACGGGGCTTACCGGAGTCTGAACGTCTTGCAGCCAGGCAGCAGCGAAGCAAAGCGTTA
CTGACGTCGCTGCATGAATGGATGGTGGAGAAGAATGGCACGTTGTCGAAAAAATCCCGACTGGGCGAAGCGTTCAGCTA
TGTCCTGAATCAGTGGGACGCCCTCTGTTATTACAGTGATGACGGTCTGGCGGAGGCGGACAATAACACAGCAGAAAGAG
CGCTTCGTGCCGTCTGTCTCGGGAAAAAGAATTCTTATGACCTTTGTCAAATATTAAGTCCAAAAAGACCTTACGCAGCT
CCGGGAGCTTCGTTATATCGCGGATTAAAGAACCTGAAACAGTCAGACTGTATCTTGGATTTTACAAACTCTTATTCGGG
GATTTTAGCCCCATGA

Protein sequence :
MSRKYLIRITELERLLSEQAEALRQKDQQLSLVEETEAFLRSALARAEEKIEEEERETEHLRAQIEKLRRMLFGTRSEKL
QREVEQAEAQLKQREQESDRYSGREDDPQVPRQLRQSRHRRPLPAHLPREIHRLEPEESCCPECGSELDYLGEVSAEQLE
LVSSALKVIRTVRVKKACTKCDCIVEAPAPSRPIERGIAGSGLLARVLAGQYCEHLPLYRQSEIFARQGAELSRALLSNW
VDACCQLMTPLNDALYRYVMNTRKVHTDDIPVKVLAPGRKKAKTGRIWTYVRDDRNAGSSDRQGKHPVQHLRPFRGILQA
DAFSGYDRLFSAEREGGALTEVACWAHARRKIHDVYISSKSTTAEEALKRISELYAIEDEIRGLPESERLAARQQRSKAL
LTSLHEWMVEKNGTLSKKSRLGEAFSYVLNQWDALCYYSDDGLAEADNNTAERALRAVCLGKKNSYDLCQILSPKRPYAA
PGASLYRGLKNLKQSDCILDFTNSYSGILAP

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
Z1161 NP_286696.1 hypothetical protein Not tested TAI Protein 0.0 96
Z1600 NP_287104.1 hypothetical protein Not tested TAI Protein 0.0 96
Z4340 NP_289564.1 hypothetical protein Not tested OI-122 Protein 1e-154 92
tnp AEA34687.1 IS66 family transposase Not tested Not named Protein 3e-138 84
st57 CAC81895.1 ST57 protein Not tested LEE II Protein 1e-104 60
Z4337 NP_289562.1 hypothetical protein Not tested OI-122 Protein 3e-109 60
Z5098 NP_290249.1 prophage-associated protein Not tested LEE Protein 3e-109 60
tnp AEA34686.1 transposase Not tested Not named Protein 5e-109 60
ECs4547 NP_312574.1 hypothetical protein Not tested LEE Protein 3e-109 60
unnamed CAC39285.1 hypothetical protein Not tested LPA Protein 3e-109 60
unnamed AAC31494.1 L0015 Not tested LEE Protein 3e-109 60
unnamed ACU09439.1 IS66 family element transposase Not tested LEE Protein 2e-109 60
Z1131 NP_286666.1 hypothetical protein Not tested TAI Protein 2e-108 60
Z1570 NP_287074.1 hypothetical protein Not tested TAI Protein 2e-108 60
unnamed AAL08460.1 unknown Not tested SRL Protein 6e-93 59
unnamed CAI43806.1 hypothetical protein Not tested LEE Protein 1e-108 57
unnamed AAL57570.1 unknown Not tested LEE Protein 3e-109 57
aec53 AAW51736.1 Aec53 Not tested AGI-3 Protein 2e-78 52
ECO103_3554 YP_003223421.1 hypothetical protein Not tested LEE Protein 1e-82 49
Z4317 NP_289543.1 hypothetical protein Not tested OI-122 Protein 1e-82 49
BCAM0248 YP_002232880.1 putative transposase Not tested BcenGI11 Protein 8e-73 47

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
ECABU_c48760 YP_006108785.1 putative transposase VFG1736 Protein 9e-166 87
ECABU_c48760 YP_006108785.1 putative transposase VFG0793 Protein 1e-109 60
ECABU_c48760 YP_006108785.1 putative transposase VFG1051 Protein 4e-93 59