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Name : papA (ECABU_c48540) Accession : YP_006108764.1 Strain : Escherichia coli ABU 83972 Genome accession: NC_017631 Putative virulence/resistance : Virulence Product : major pilin subunit PapA Function : - COG functional category : - COG ID : - EC number : - Position : 4952347 - 4952916 bp Length : 570 bp Strand : - Note : - DNA sequence : ATGATTAAGTCGGTTATTGCCGGTGCGGTAGCTATGGCAGTGGTGTCTTTTGGTGTAAATGCTGCTCCAACTATTCCACA GGGCCAGGGAGAAGTAACTTTCAAAGGAACTGTTGTTGACGCTCCATGTGGTATTGAAACGCAGTCTGCAAGACAGGAAA TTGATTTTGGCCAGATCTCTAAATCCTTCCTGCAGGAGGGCGGGGAAAGCCAGCCGAAAGATCTGAATATTAAGCTTGTA AATTGCGATATCACAAATTTTAAAAAAGCACCTGTTGGTGGTGGGGCAACCAAAGCAGGAACGGTGGCTCTGACTTTTTC CGGCGTATCCAGTGGGAACAATAAAGATATGCTGCAAACAGTTGGCGCAACTAATACAGCTATCGTTGTTGTCGATCCGC ATGGCAAACGTGTGAAGTTTGATGGGGCGACCACTACCGGTCCTTCAAATCTGGTTGATGGTGATAACACGATTCATTTT ACTGCTGCGGTCAGAAAGGATGATAGTGGCAACCCTGTAACAGAAGGTGCTTTCTCAGCAGTTGCGAATTTCAACCTTAC TTATCAGTAA Protein sequence : MIKSVIAGAVAMAVVSFGVNAAPTIPQGQGEVTFKGTVVDAPCGIETQSARQEIDFGQISKSFLQEGGESQPKDLNIKLV NCDITNFKKAPVGGGATKAGTVALTFSGVSSGNNKDMLQTVGATNTAIVVVDPHGKRVKFDGATTTGPSNLVDGDNTIHF TAAVRKDDSGNPVTEGAFSAVANFNLTYQ |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| papA | AAL67417.1 | PapA | Virulence | PAI II CFT073 | Protein | 2e-63 | 83 |
| papA_2 | NP_757036.1 | PapA protein | Virulence | PAI II CFT073 | Protein | 4e-63 | 83 |
| papA | NP_755467.1 | PapA protein | Virulence | PAI I CFT073 | Protein | 2e-61 | 83 |
| papA | AAC61718.1 | PapA | Virulence | PAI I CFT073 | Protein | 2e-40 | 79 |
| prfA | CAD42031.1 | PrfA protein | Virulence | PAI II 536 | Protein | 3e-58 | 75 |
| papA | YP_002414017.1 | P-fimbriae major subunit | Not tested | Not named | Protein | 4e-53 | 71 |
| papA | YP_854256.1 | major fibrial protein | Virulence | PAI I APEC-O1 | Protein | 8e-44 | 63 |
| papA | AAZ04426.1 | major fibrial protein | Virulence | PAI I APEC-O1 | Protein | 6e-44 | 63 |
| pixA | CAE85161.1 | PixA protein | Not tested | PAI V 536 | Protein | 2e-33 | 50 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| papA | YP_006108764.1 | major pilin subunit PapA | VFG0893 | Protein | 1e-63 | 83 |
| papA | YP_006108764.1 | major pilin subunit PapA | VFG0882 | Protein | 7e-62 | 83 |
| papA | YP_006108764.1 | major pilin subunit PapA | VFG1550 | Protein | 1e-58 | 75 |
