Gene Information

Name : papH (ECABU_c48530)
Accession : YP_006108763.1
Strain : Escherichia coli ABU 83972
Genome accession: NC_017631
Putative virulence/resistance : Virulence
Product : minor pilin subunit PapH
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 4951690 - 4952277 bp
Length : 588 bp
Strand : -
Note : -

DNA sequence :
ATGAGGCTGCAATTCTCTGCTCTGTTTTTCTTTTTTGGCTGTGTGTTTGTTCATGGTGTTTTTGCCGGTCCGTTTCCTCC
GCCCGGCATGACCCTTCCTGAATACTGGGGAGAAGAACACGTATGGTGGGACGGCAGGGCTGCTTTTCATGGTGAGGTTG
TCAGACCTGCCTGTACTCTGGCGATGGAAGACGCCTGGCAGATTATTGATATGGGGGAAACCCCGGTTCGGGATTTACAG
AATGGTTTTTCCGGACCTGAAAGAAAATTCAGCCTCCGGCTCAGGAACTGTGAATTTAACAGTCAGGGTGGGAACCTTTT
CTCTGATTCCCGGATAAGGGTGACTTTCGATGGCGTCCGGGGTGAAACGCCGGATAAGTTTAATTTATCCGGTCAGGCAA
AAGGAATTAATCTGCAGATAGCTGATGCCAGGGGGAATATTTCCCGGGCAGGGAAAGTAATGCCTGCAATACCATTGACG
GGTAATGAAGAAGCGCTGGATTACACCCTCAGAATTGTGAGAAACGGAAAAAAACTTGAAGCCGGAAATTATTTTGCTGT
GCTGGGATTCCGGGTCGATTATGAGTGA

Protein sequence :
MRLQFSALFFFFGCVFVHGVFAGPFPPPGMTLPEYWGEEHVWWDGRAAFHGEVVRPACTLAMEDAWQIIDMGETPVRDLQ
NGFSGPERKFSLRLRNCEFNSQGGNLFSDSRIRVTFDGVRGETPDKFNLSGQAKGINLQIADARGNISRAGKVMPAIPLT
GNEEALDYTLRIVRNGKKLEAGNYFAVLGFRVDYE

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
papH AAL67416.1 PapH Virulence PAI II CFT073 Protein 8e-77 99
papH AAZ04425.1 fimbrial regulatory protein Virulence PAI I APEC-O1 Protein 3e-77 99
papH YP_002414016.1 minor pilin protein PapH Not tested Not named Protein 3e-76 99
papH NP_755466.1 PapH protein Virulence PAI I CFT073 Protein 1e-76 99
papH_2 NP_757035.1 PapH protein Virulence PAI II CFT073 Protein 1e-76 99
papH YP_854255.1 minor pilin subunit PapH Virulence PAI I APEC-O1 Protein 4e-77 99
prfH CAD42030.1 PrfH protein Virulence PAI II 536 Protein 5e-78 97
pixH CAE85160.1 PixH protein Not tested PAI V 536 Protein 7e-58 69

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
papH YP_006108763.1 minor pilin subunit PapH VFG0883 Protein 3e-77 99
papH YP_006108763.1 minor pilin subunit PapH VFG0894 Protein 3e-77 99
papH YP_006108763.1 minor pilin subunit PapH VFG1549 Protein 2e-78 97