Gene Information

Name : papK (ECABU_c48490)
Accession : YP_006108759.1
Strain : Escherichia coli ABU 83972
Genome accession: NC_017631
Putative virulence/resistance : Virulence
Product : minor pilin subunit PapK
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 4947158 - 4947694 bp
Length : 537 bp
Strand : -
Note : -

DNA sequence :
ATGATAAAAAGCACAGGCGCTCTTTTACTGTTTGCCGCACTGTCTGCCGGGCAGGCAATGGCCTCAGATGTGGCATTCAG
GGGTAATCTGCTTGACAGACCCTGCCATGTGTCCGGTGACAGTCTGAATAAACATGTCGTCTTCAAAACCCGCGCGTCCA
GGGATTTCTGGTATCCGCCCGGACGTTCGCCGACAGAGTCGTTTGTCATCAGGCTGGAAAACTGCCATGCAACAGCAGTT
GGCAAAATTGTGACCCTGACCTTTAAGGGAACGGAAGAGGCGGCCCTCCCGGGCCATCTGAAGGTAACCGGAGTGAATGC
CGGCCGGTTAGGCATTGCACTGCTGGACACCGATGGCAGCAGTCTGCTGAAACCCGGCGCTTCCCATAATAAAGGCCAGG
GGGAAAAGGTTACCGGAAACAGTCTTGAGCTTCCTTTCGGCGCGTATGTTGTGGCAACGCCGGAAGCCCTGCGGACGAAG
AGTGTGGTACCCGGTGATTATGAAGCAACAGCCACGTTTGAATTAACATATCGTTAG

Protein sequence :
MIKSTGALLLFAALSAGQAMASDVAFRGNLLDRPCHVSGDSLNKHVVFKTRASRDFWYPPGRSPTESFVIRLENCHATAV
GKIVTLTFKGTEEAALPGHLKVTGVNAGRLGIALLDTDGSSLLKPGASHNKGQGEKVTGNSLELPFGAYVVATPEALRTK
SVVPGDYEATATFELTYR

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
prfK CAD42026.1 PrfK protein Virulence PAI II 536 Protein 3e-74 100
papK AAZ04421.1 P pilus protein Virulence PAI I APEC-O1 Protein 2e-73 99
papK AAL67411.1 PapK Virulence PAI II CFT073 Protein 1e-73 99
papK YP_854251.1 pilus assembly protein PapK Virulence PAI I APEC-O1 Protein 3e-73 99
papK YP_002414012.1 Fimbrial adapter PapK Not tested Not named Protein 1e-73 99
papK NP_755461.1 PapK protein Virulence PAI I CFT073 Protein 1e-73 99
papK_2 NP_757030.1 PapK protein Virulence PAI II CFT073 Protein 1e-73 99

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
papK YP_006108759.1 minor pilin subunit PapK VFG1545 Protein 1e-74 100
papK YP_006108759.1 minor pilin subunit PapK VFG0887 Protein 4e-74 99
papK YP_006108759.1 minor pilin subunit PapK VFG0898 Protein 4e-74 99