Gene Information

Name : papE (ECABU_c48480)
Accession : YP_006108758.1
Strain : Escherichia coli ABU 83972
Genome accession: NC_017631
Putative virulence/resistance : Virulence
Product : minor pilin subunit PapE
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 4946610 - 4947131 bp
Length : 522 bp
Strand : -
Note : -

DNA sequence : 
ATGAAAAAGATAAGAGGTTTGTGTCTTCCGGTAATGCTGGGGGCAGTGTTAATGTCTCAGCATGTACATGCAGCTGATAA
TCTGACCTTTAAAGGAAAACTGATTATTCCTGCCTGTACTGTACAAAATGCTGAAGTTAACTGGGGTGATATTGAAATTC
AGAATCTGGTACAGAGTGGCGGAAATCAGAAAGACTTTACCGTCGACATGAACTGCCCCTATAGCCTGGGAACCATGAAA
GTTACAATAACATCAAATGGTCAGACAGGTAATTCGATACTGGTGCCTAATACTTCAACCGCTTCTGGTGATGGGCTGCT
CATTTATCTTTACAATAGTAATAACAGTGGTATTGGTAACGCTGTCACTTTAGGGAGTCAGTTTACGCCCGGAAAAATTA
CAGGAACAGCACCAGCCAGAAAGATTACTCTTTACGCAAAACTTGGATATAAAGGAAATATGCAGAGTTTGAGGGCGGGA
ACATTTTCTGCAACGGCAACGCTGGTTGCATCATATTCGTAA

Protein sequence : 
MKKIRGLCLPVMLGAVLMSQHVHAADNLTFKGKLIIPACTVQNAEVNWGDIEIQNLVQSGGNQKDFTVDMNCPYSLGTMK
VTITSNGQTGNSILVPNTSTASGDGLLIYLYNSNNSGIGNAVTLGSQFTPGKITGTAPARKITLYAKLGYKGNMQSLRAG
TFSATATLVASYS

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
prfE CAD42025.1 PrfE protein Virulence PAI II 536 Protein 2e-75 98
prsE YP_002414011.1 Fimbrial protein Not tested Not named Protein 6e-62 75
papE NP_755460.1 PapE protein Virulence PAI I CFT073 Protein 2e-63 75
papE_2 NP_757029.1 PapE protein Virulence PAI II CFT073 Protein 2e-63 75
papE AAZ04420.1 P pilus tip protein Virulence PAI I APEC-O1 Protein 5e-62 73
papE YP_854250.1 PapE protein Virulence PAI I APEC-O1 Protein 8e-62 73

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
papE YP_006108758.1 minor pilin subunit PapE VFG1544 Protein 8e-76 98
papE YP_006108758.1 minor pilin subunit PapE VFG0888 Protein 6e-64 75
papE YP_006108758.1 minor pilin subunit PapE VFG0899 Protein 6e-64 75