Gene Information

Name : yjdB (ECABU_c46670)
Accession : YP_006108590.1
Strain : Escherichia coli ABU 83972
Genome accession: NC_017631
Putative virulence/resistance : Resistance
Product : putative sulfatase
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 4760957 - 4762630 bp
Length : 1674 bp
Strand : -
Note : -

DNA sequence :
ATGCGCACTTTGTTCGATGGAAACACCGTGATGTTGAAGCGCCTACTAAAAAGACCCTCTTTAAATTTATTCTCCTGGTT
ATTACTTGCTACTTTTTATATCTCAGTCTGCCTGAATATCGCCTTTTTTAAACAGGTGCTACAGGTGTTACCGCTGGATT
CACTGCATAACGTGCTGGTTTTCTTGTCGATGCCGGTCGTCGCATTCAGCGTGATTAATATTGTCCTGACACTAGGCTCT
TTCTTATGGCTTAATCGTCCACTCGCCTGCCTGTTTATTCTGGTCGGTGCGGCTGCACAATATTTCATCATGACCTATGG
CATCGTCATCGACCGTTCAATGATCACCAATATCATTGATACTACGCCGGCGGAAAGTTATGCGTTGATGACGCCACGAA
TGTTATTAACGCTGGGGTTAAGTGGCGTGTTGGCCGCGATTATTGCCTGCTGGATCAAAATCAAACCCACCACCTCACGC
CTGCGCAGCGTTCTTTTCCGCGGGGCCAACATCCTGATTTCTGTGCTGCTGATTCTGCTGGTTGCCGCACTGTTCTACAA
AGACTATGCCTCGCTGTTTCGCAACAACAAAGAGCTGGTGAAATCCTTAAGCCCGTCCAACAGCATTGTTGCTAGCTGGT
CGTGGTACTCTCACCAGCGGTCAGCCAACCTGCCACTGATACGCATTGGTGAAGATGCTCACCGCAACCCATTAATGCAA
AATGGGAAACGTAAAAACCTGACCATTTTGATCGTCGGCGAAACCTCGCGGGCGGAGAACTTCTCCCTCAACGGTTACCA
GCGTGAAACTAACCCGCGGCTGGCAAAAGATAACGTGGTCTATTTCCCTAATACCGCCTCTTGCGGCACAGCAACAGCCG
TCTCAGTGCCGTGCATGTTCTCGGATATGCCGCGTGAGCACTACAAAGAAGAGCTGGCACAGCACCAGGAAGGCGTGCTG
GATATCATTCAGCGAGCGGGCATCAACGTGCTGTGGAATGACAACGATGGCGGCTGTAAAGGCGTTTGCGATCGCGTACC
TCACCAGAACATCACCGCGCTGAACCTGCCTGGTCAGTGCATCAACGGCGAATGCTATGACGAAGTGCTGTTCCACGGGC
TGGAAGAGTACATCAATAATCTGCAAAGCGATGGCCTCATTGTATTACACACTATCGGCAGCCACGGCCCGACCTATTAC
AACCGCTATCCGCCGCAGTTCAGGAAATTTACCCCAACCTGCGACACTAACGAGATCCAGACCTGTACCAAAGAGCAACT
GGTGAACACTTACGACAACACGCTGGTTTACGTCGACTATATTGTTGATAAAGCGATTAATCTGCTGAAAGAACATCAGG
ATAAATTTACCACCAGCCTGGTTTATCTTTCTGACCACGGTGAATCGTTAGGTGAAAATGGCATCTATCTGCACGGTCTG
CCTTATGCCATCGCCCCGGATAGCCAAAAACAGGTGCCGATGCTGCTGTGGCTATCGGAGGATTATCAAAAACGGTATCA
GGTTGACCAGAACTGCCTGCAAAAACAGGCGCAAACGCAACACTATTCACAAGACAATTTATTCTCAACCTTATTGGGCC
TGACTGGCGTTGAGACGAAGTATTACCAGGCTGCGGATGATATTCTGCAAACTTGCAGGAGAGTGAGTGAATGA

Protein sequence :
MRTLFDGNTVMLKRLLKRPSLNLFSWLLLATFYISVCLNIAFFKQVLQVLPLDSLHNVLVFLSMPVVAFSVINIVLTLGS
FLWLNRPLACLFILVGAAAQYFIMTYGIVIDRSMITNIIDTTPAESYALMTPRMLLTLGLSGVLAAIIACWIKIKPTTSR
LRSVLFRGANILISVLLILLVAALFYKDYASLFRNNKELVKSLSPSNSIVASWSWYSHQRSANLPLIRIGEDAHRNPLMQ
NGKRKNLTILIVGETSRAENFSLNGYQRETNPRLAKDNVVYFPNTASCGTATAVSVPCMFSDMPREHYKEELAQHQEGVL
DIIQRAGINVLWNDNDGGCKGVCDRVPHQNITALNLPGQCINGECYDEVLFHGLEEYINNLQSDGLIVLHTIGSHGPTYY
NRYPPQFRKFTPTCDTNEIQTCTKEQLVNTYDNTLVYVDYIVDKAINLLKEHQDKFTTSLVYLSDHGESLGENGIYLHGL
PYAIAPDSQKQVPMLLWLSEDYQKRYQVDQNCLQKQAQTQHYSQDNLFSTLLGLTGVETKYYQAADDILQTCRRVSE

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
Z1140 NP_286675.1 hypothetical protein Not tested TAI Protein 4e-92 41
Z1579 NP_287083.1 hypothetical protein Not tested TAI Protein 4e-92 41

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
yjdB YP_006108590.1 putative sulfatase BAC0485 Protein 2e-154 59