Gene Information

Name : ECABU_c41380 (ECABU_c41380)
Accession : YP_006108102.1
Strain : Escherichia coli ABU 83972
Genome accession: NC_017631
Putative virulence/resistance : Virulence
Product : YagB/YeeU/YfjZ family protein
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 4206611 - 4206925 bp
Length : 315 bp
Strand : +
Note : -

DNA sequence :
ATGCAACAAGAATGGGGGCTTCCCTGTACCGTAACACCACGCTTCACTGCTCGACTGGTACAGGAAAGACATAACCTGCA
TTACCTGGCTGATCGGGCCGCAATCACCGGGAAATTCAGCTCCCCGGATCTGCTGCATATCGACCAGGCTTTTCCGGTGT
TGATGAAACAACTGGAGCTGAAACTGGCTGACGGTGAACTCTCCCCCTGCCAACAACGTACCGTCACGCTATACGCCAAA
GGACTAACCTGCGAAGCCGATACGCTGGGTTCCTGTGGTTACGTCTATATCGCTATTTATCCCACTCAACGCTGA

Protein sequence :
MQQEWGLPCTVTPRFTARLVQERHNLHYLADRAAITGKFSSPDLLHIDQAFPVLMKQLELKLADGELSPCQQRTVTLYAK
GLTCEADTLGSCGYVYIAIYPTQR

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
aec75 AAW51758.1 Aec75 Not tested AGI-3 Protein 1e-32 76
yeeU NP_838486.1 structural protein Not tested SHI-1 Protein 1e-32 76
yeeU NP_708772.1 structural protein Not tested SHI-1 Protein 1e-32 76
ECO103_3591 YP_003223448.1 hypothetical protein Not tested LEE Protein 9e-33 76
unnamed AAK00481.1 unknown Not tested SHI-1 Protein 7e-33 76
yeeU CAD42100.1 hypothetical protein Not tested PAI II 536 Protein 2e-32 75
yeeU ADD91700.1 YeeU Not tested PAI-I AL862 Protein 3e-32 75
unnamed CAD66206.1 hypothetical protein Not tested PAI III 536 Protein 7e-31 74
yeeU YP_853121.1 antitoxin of the YeeV-YeeU toxin-antitoxin system Virulence PAI IV APEC-O1 Protein 2e-31 74
Z1220 NP_286755.1 structural protein Not tested TAI Protein 1e-30 74
Z1658 NP_287161.1 structural protein Not tested TAI Protein 1e-30 74
unnamed AAL08477.1 unknown Not tested SRL Protein 8e-31 72

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
ECABU_c41380 YP_006108102.1 YagB/YeeU/YfjZ family protein VFG0662 Protein 3e-33 76
ECABU_c41380 YP_006108102.1 YagB/YeeU/YfjZ family protein VFG1619 Protein 1e-32 75
ECABU_c41380 YP_006108102.1 YagB/YeeU/YfjZ family protein VFG1681 Protein 3e-31 74
ECABU_c41380 YP_006108102.1 YagB/YeeU/YfjZ family protein VFG1068 Protein 3e-31 72