Gene Information

Name : ECABU_c41360 (ECABU_c41360)
Accession : YP_006108100.1
Strain : Escherichia coli ABU 83972
Genome accession: NC_017631
Putative virulence/resistance : Virulence
Product : phage-associated protein
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 4205269 - 4206087 bp
Length : 819 bp
Strand : +
Note : -

DNA sequence :
ATGAAATTAGCCAGCCGCTTTGGTCGCGTAAATCAAATCCGTCGCGATCGCCCATTAACGCATGACGAATTGATGCAGTA
TGTCCCCAGCGTATTCGGGGAAAATAAGCACGAATCACGCAGCGAACGCTATACCTATATTCCCACCATTACCCTGCTCG
ATAACCTCCAGCGTGAAGGATTTCATCCTTTCTTTGCCTGCCAGACCCGCGTTCGTGATGTGGGTAAACGTGAGCATACA
AAACACATGCTGCGTCTGCGCCGGGAAGACCAGATCAATCACAACCAGGTGCCGGAAATTATTCTGCTCAACAGCCATGA
CGGTTCCAGTTCTTATCAGATGCTGCCAGGGCTGTTCCGTTCTGTTTGTTGTAACGGGCTGGTCTGCGGCGAGTCGTTTG
GTGAAGTACGGGTACCGCATAAAGGCAATGTGGTGGAGAAAGTGATTGAAGGCGCTTATGAAGTCCTCAGTGTTTTTGAC
CAGGTTGAAGAGAAACGCGATGCCATGCAGTCGCTGATGCTGCCTCCCCCTGCGCAACAGGCGCTGGCAAAGGCGGCGCT
GACTTACCGCTTTGGCGAAGAGCACCAGCCGGTGACGGAATCCCAGTTACTGGCTCCCCGCCGCTGGCAGGATGAATCCG
GTGATCTGTGGACGACCTACCAGCGAATTCAGGAGAACCTGATCAAAGGCGGTTTAAACGGGCGGACGGCAAAAGGTGGT
CGCACGCACACCCGCGCCATTCAAGGCATCGACGGCGATATCAAACTCAACCGCGCCCTGTGGGTGATGGCTGAAAACAT
GTTGCAACTGGCCTCATAA

Protein sequence :
MKLASRFGRVNQIRRDRPLTHDELMQYVPSVFGENKHESRSERYTYIPTITLLDNLQREGFHPFFACQTRVRDVGKREHT
KHMLRLRREDQINHNQVPEIILLNSHDGSSSYQMLPGLFRSVCCNGLVCGESFGEVRVPHKGNVVEKVIEGAYEVLSVFD
QVEEKRDAMQSLMLPPPAQQALAKAALTYRFGEEHQPVTESQLLAPRRWQDESGDLWTTYQRIQENLIKGGLNGRTAKGG
RTHTRAIQGIDGDIKLNRALWVMAENMLQLAS

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
yafZ YP_854321.1 hypothetical protein Not tested PAI I APEC-O1 Protein 1e-92 76
ORF_47 AAZ04456.1 conserved hypothetical protein Not tested PAI I APEC-O1 Protein 8e-93 76
c5156 NP_757004.1 hypothetical protein Not tested PAI II CFT073 Protein 1e-92 75
S3199 NP_838482.1 hypothetical protein Not tested SHI-1 Protein 2e-93 75
SF2994 NP_708768.1 hypothetical protein Not tested SHI-1 Protein 2e-93 75
unnamed AAK00477.1 unknown Not tested SHI-1 Protein 5e-62 74
yafZ ADD91704.1 YafZ Not tested PAI-I AL862 Protein 8e-95 74
Z1655 NP_287158.1 hypothetical protein Not tested TAI Protein 2e-95 74
unnamed CAD42096.1 hypothetical protein Not tested PAI II 536 Protein 2e-95 74
z1215 CAD33785.1 Z1215 protein Not tested PAI I 536 Protein 5e-96 74
unnamed CAI43843.1 hypothetical protein Not tested LEE Protein 8e-95 74
ECO103_3587 YP_003223444.1 hypothetical protein Not tested LEE Protein 2e-94 74
aec71 AAW51754.1 Aec71 Not tested AGI-3 Protein 8e-95 74
Z1215 NP_286750.1 hypothetical protein Not tested TAI Protein 2e-95 74
yafZ CAE85199.1 YafZ protein Not tested PAI V 536 Protein 2e-95 73
unnamed CAD66201.1 hypothetical protein Not tested PAI III 536 Protein 1e-91 73
ORF SG86 AAN62307.1 conserved hypothetical protein Not tested PAGI-3(SG) Protein 2e-74 58
ORF C80 AAN62174.1 conserved hypothetical protein; associated with oriT region on plasmids Not tested PAGI-2(C) Protein 2e-75 56

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
ECABU_c41360 YP_006108100.1 phage-associated protein VFG0658 Protein 9e-94 75
ECABU_c41360 YP_006108100.1 phage-associated protein VFG1615 Protein 1e-95 74
ECABU_c41360 YP_006108100.1 phage-associated protein VFG1526 Protein 3e-96 74
ECABU_c41360 YP_006108100.1 phage-associated protein VFG1676 Protein 8e-92 73