Gene Information

Name : ECABU_c41300 (ECABU_c41300)
Accession : YP_006108094.1
Strain : Escherichia coli ABU 83972
Genome accession: NC_017631
Putative virulence/resistance : Virulence
Product : putative DNA-binding transcriptional regulator
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 4199802 - 4200485 bp
Length : 684 bp
Strand : +
Note : -

DNA sequence : 
ATGAAAACACAGCATGATCATCATGACCGCCTGTCTGTCAGGCTATCAGTCATTATCAGCCGCTTACTGGCTGGTGAATC
TCTGGAGCTTAAAGTATTAGCTGATGAATTTGGTGTCTCAGAACGCACCCTACAGCGGGATTTTCAGCAACGCCTGATCC
ATCTGGATCTTGAGCATCGCAGCGGAAGTTACCGACTTATCCGCCAAACAGGCCGGGAGCACTTACCCAATACATTTGCG
TTTATACGTAATTCAGGAATTTCAGGAATCATTCCGGCTCAAAACCGCAAGTTGATCCGGTTGATTGCCAGCAATTCCGG
CGTATCGCCGTGTCTTATTGGGCATGGGGCATTATCTTCTCCCGTCACGCAGACTGCCTGTTTTCTGAAACTGGCGGAAG
CTATCCGCGACTACCGCGCCGTTACATTATTGGTTAACGGTAAAAGCTACGAAGCAGTAGCTCCCCGCCGTCTGATATTT
CAGTCCAAAAACTGGTTTCTTGTTGCTACCCGCACCAGAAATTTACAGGTGTTTCGGATGGAAGACGTTAACGCCGTAAC
CGTTCTGGATACCTCTTTCCGCAGAAAGCCTGAACTTGATGCTCTGACTGCCAGTGAAGAGTTTATTTCAGCCCTCCCTC
ACTTTCGTTTCATAAGTGACGTAATTCAGACCTTCAGAGAGTAA

Protein sequence : 
MKTQHDHHDRLSVRLSVIISRLLAGESLELKVLADEFGVSERTLQRDFQQRLIHLDLEHRSGSYRLIRQTGREHLPNTFA
FIRNSGISGIIPAQNRKLIRLIASNSGVSPCLIGHGALSSPVTQTACFLKLAEAIRDYRAVTLLVNGKSYEAVAPRRLIF
QSKNWFLVATRTRNLQVFRMEDVNAVTVLDTSFRRKPELDALTASEEFISALPHFRFISDVIQTFRE

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
unnamed CAD33782.1 hypothetical protein Not tested PAI I 536 Protein 5e-51 48
c5160 NP_757008.1 transcriptional regulator YfjR Not tested PAI II CFT073 Protein 3e-50 48
APECO1_3492 YP_854319.1 transcriptional regulator Not tested PAI I APEC-O1 Protein 3e-50 48
yfjR AAZ04453.1 transcriptional regulator Not tested PAI I APEC-O1 Protein 2e-50 48
unnamed CAD42094.1 hypothetical protein Not tested PAI II 536 Protein 1e-50 48

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
ECABU_c41300 YP_006108094.1 putative DNA-binding transcriptional regulator VFG1523 Protein 3e-51 48
ECABU_c41300 YP_006108094.1 putative DNA-binding transcriptional regulator VFG1613 Protein 7e-51 48