Gene Information

Name : gspG2 (ECABU_c37490)
Accession : YP_006107721.1
Strain : Escherichia coli ABU 83972
Genome accession: NC_017631
Putative virulence/resistance : Virulence
Product : pseudopilin
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 3796788 - 3797225 bp
Length : 438 bp
Strand : +
Note : cryptic, general secretion pathway

DNA sequence : 
ATGCGCGCAACGGATAAGCAACGCGGTTTTACATTACTGGAAATTATGGTGGTTATTGTCATCATTGGCGTACTTGCCAG
CCTGGTGGTTCCCAACCTGATGGGCAATAAAGAAAAGGCGGATAAGCAAAAAGCCGTCAGCGATATCGTGGCACTGGAAA
ACGCCCTGGATATGTACAAACTCGACAATCATCGCTATCCAACCACAAATCAGGGGCTTGAATCCTTAGTCGAAGCGCCG
ACACTGCCACCGCTGGCCGCAAACTATAACAAGGAAGGTTATATCAAGCGTCTGCCTGCCGATCCCTGGGGCAATGATTA
TGTCCTCGTTAATCCTGGTGAACATGGTGCATACGATCTGCTTTCAGCAGGGCCCGATGGTGAAATGGGAACCGAGGACG
ACATCACCAACTGGGGTTTGAGCAAGAAGAAAAAGTAA

Protein sequence : 
MRATDKQRGFTLLEIMVVIVIIGVLASLVVPNLMGNKEKADKQKAVSDIVALENALDMYKLDNHRYPTTNQGLESLVEAP
TLPPLAANYNKEGYIKRLPADPWGNDYVLVNPGEHGAYDLLSAGPDGEMGTEDDITNWGLSKKKK

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
gspG YP_854404.1 type II secretion protein GspG Not tested PAI I APEC-O1 Protein 4e-39 65
gspG CAE85231.1 GspG, hypothetical type II secretion protein Not tested PAI V 536 Protein 3e-39 65

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
gspG2 YP_006107721.1 pseudopilin VFG2050 Protein 1e-39 65
gspG2 YP_006107721.1 pseudopilin VFG0180 Protein 1e-30 55
gspG2 YP_006107721.1 pseudopilin VFG1871 Protein 2e-30 52