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Name : gspD2 (ECABU_c37460) Accession : YP_006107718.1 Strain : Escherichia coli ABU 83972 Genome accession: NC_017631 Putative virulence/resistance : Virulence Product : general secretory pathway component Function : - COG functional category : - COG ID : - EC number : - Position : 3792142 - 3794094 bp Length : 1953 bp Strand : + Note : cryptic DNA sequence : ATGAAGGGACTCAATAAAATCACCTGCTGCTTGCTGGCAGCACTACTTATGCCTTGTGCAGGGCACGCTGAGAACGAACA ATACGGCGCTAACTTCAATAACGCCGATATCCGCCAGTTCGTGGAAATAGTGGGTCAGCATCTTGGCAAAACGATCCTGA TCGACCCTTCGGTACAGGGAACCATTTCCGTACGCAGTAATGATACGTTTAGCCAACAGGAGTACTACCAGTTCTTTTTA AGTATTCTTGATCTTTACGGTTATTCCGTGATCACGCTGGACAATGGTTTTCTGAAAGTGGTGCGCTCAGCTAATGTAAA AACATCGCCAGGGATGATTGCTGACAGTTCTCGTCCAGGCGTAGGTGATGAGTTGGTCACCCGAATCGTACCGCTTGAGA ACGTTCCTGCTCGTGACCTGGCTCCCCTGCTCCGCCAGATGATGGATGCGGGTAGCGTCGGTAATGTTGTGCATTATGAA CCCTCCAACGTTCTTATTCTGACCGGTCGTGCCTCCACCATTAATAAACTGATTGAAGTCATAAAGCGCGTTGATGTCAT CGGCACAGAGAAGCAGCAAATTATTCATCTGGAATATGCATCAGCGGAAGATCTCGCCGAGATTCTTAATCAATTAATCA GCGAAAGCCACGGTAAAAGCCAGATGCCTGCCCTCCTTTCCGCGAAGATTGTGGCGGATAAGCGAACCAACTCTCTTATC ATCAGCGGGCCGGAAAAAGCACGCCAGCGCATAACTTCATTACTGAAAAGCCTTGATGTCGAAGAGAGCGAGGAAGGAAA TACCCGGGTCTATTACCTGAAATATGCTAAAGCCACGAATCTGGTGGAAGTGCTAACCGGTGTTTCCGAAAAGCTGAAAG ATGAAAAAGGGAATTCGCGTAAGCCTTCTTCTACTTCTGCGATGGATAATGTGGCCATTACCGCCGATGAACAGACCAAC TCGTTGGTCATTACCGCTGACCAGTCCGTCCAGGAGAAACTCGCCACGGTAATTGCGCGTCTGGATATTCGCCGTGCACA GGTGCTGGTTGAGGCAATCATCGTCGAAGTTCAGGATGGAAATGGACTCAACCTCGGCGTGCAATGGGCGAATAAAAACG TTGGCGCACAGCAATTTACCAATACGGGATTACCGGTTTTTAACGCTGCGCAAGGTGTAGCTGATTATAAAAAGAATGGC GGGATCACCAGCGCGAATCCTGCCTGGGATATGTTTAGCGCCTACAATGGCATGGCTGCAGGCTTCTTCAATGGCGACTG GGGCGTATTGTTGACTGCGCTGGCCAGTAACAATAAAAATGACATCCTCGCCACCCCGAGCATCGTAACGCTGGATAATA AACTCGCGTCCTTCAACGTTGGTCAGGATGTGCCGGTGCTATCCGGCTCTCAGACCACTTCTGGGGATAACGTCTTTAAT ACTGTCGAACGCAAAACGGTGGGCACAAAACTCAAAGTCACTCCGCAGGTCAATGAAGGCGACGCGGTACTGCTCGAAAT AGAGCAGGAGGTTTCCAGCGTTGACTCTTCGTCTAATTCGACGCTCGGCCCGACATTTAACACCCGTACTATTCAAAACG CCGTGCTGGTTAAAACCGGTGAAACGGTGGTCCTGGGCGGATTGCTGGATGATTTTTCTAAAGAGCAAGTGTCAAAGGTT CCTCTGCTTGGCGATATTCCTTTAGTGGGACAACTCTTCCGCTATACCTCGACCGAGCGCGCTAAACGCAACCTGATGGT ATTTATCCGTCCGACGATTATCCGTGACGATGATGTTTATCGCTCACTGTCAAAAGAGAAATACACCCGCTACCGCCAGG AGCAACAGCTGCGAATCGACGGGAAATCAAAAGCGCTGATTGGCTCGGAAGATTTGCCGGTGCTGGATGAGAACACGTTC AACAGTCACGCTCCTGCGCCATCGTCACGGTGA Protein sequence : MKGLNKITCCLLAALLMPCAGHAENEQYGANFNNADIRQFVEIVGQHLGKTILIDPSVQGTISVRSNDTFSQQEYYQFFL SILDLYGYSVITLDNGFLKVVRSANVKTSPGMIADSSRPGVGDELVTRIVPLENVPARDLAPLLRQMMDAGSVGNVVHYE PSNVLILTGRASTINKLIEVIKRVDVIGTEKQQIIHLEYASAEDLAEILNQLISESHGKSQMPALLSAKIVADKRTNSLI ISGPEKARQRITSLLKSLDVEESEEGNTRVYYLKYAKATNLVEVLTGVSEKLKDEKGNSRKPSSTSAMDNVAITADEQTN SLVITADQSVQEKLATVIARLDIRRAQVLVEAIIVEVQDGNGLNLGVQWANKNVGAQQFTNTGLPVFNAAQGVADYKKNG GITSANPAWDMFSAYNGMAAGFFNGDWGVLLTALASNNKNDILATPSIVTLDNKLASFNVGQDVPVLSGSQTTSGDNVFN TVERKTVGTKLKVTPQVNEGDAVLLEIEQEVSSVDSSSNSTLGPTFNTRTIQNAVLVKTGETVVLGGLLDDFSKEQVSKV PLLGDIPLVGQLFRYTSTERAKRNLMVFIRPTIIRDDDVYRSLSKEKYTRYRQEQQLRIDGKSKALIGSEDLPVLDENTF NSHAPAPSSR |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| gspD | CAE85234.1 | GspD, hypothetical type II secretion protein | Not tested | PAI V 536 | Protein | 6e-124 | 45 |
| gspD | YP_854407.1 | type II secretion protein GspD | Not tested | PAI I APEC-O1 | Protein | 3e-131 | 44 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| gspD2 | YP_006107718.1 | general secretory pathway component | VFG2047 | Protein | 1e-121 | 45 |
