Gene Information

Name : kpsT (ECABU_c33550)
Accession : YP_006107350.1
Strain : Escherichia coli ABU 83972
Genome accession: NC_017631
Putative virulence/resistance : Virulence
Product : polysialic acid capsule biosynthesis transport protein KpsT
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 3418953 - 3419627 bp
Length : 675 bp
Strand : -
Note : -

DNA sequence : 
ATGATTAAGATTGAGAATTTGACGAAGTCATATCGTACGCCAACGGGGCGACACTATGTGTTTAAGGATTTAAACATCGA
AATCCCTTCAGGAAAAAGCGTTGCCTTTATTGGTCGTAATGGTGCGGGTAAATCAACGTTACTGAGAATGATTGGTGGCA
TTGACCGCCCCGATAGCGGAAAGATCATCACCAATAAAACGATATCATGGCCAGTCGGCCTCGCCGGTGGATTCCAGGGA
AGTTTAACCGGACGCGAAAACGTAAAATTTGTTGCGCGGTTATACGCGAAGCAAGAAGAGCTGAAAGAGAAAATTGAGTT
TGTCGAAGAATTTGCCGAACTCGGTAAGTACTTTGATATGCCGATCAAAACTTACTCCTCAGGTATGCGATCGCGTTTAG
GCTTTGGTTTAAGCATGGCATTTAAGTTTGATTATTATATCGTCGATGAAGTAACAGCTGTCGGTGATGCCAGGTTTAAA
GAGAAGTGCGCTCAATTGTTTAAAGAAAGGCATAAAGAGTCTAGCTTTTTGATGGTTTCACATAGTTTGAATTCATTGAA
AGAGTTTTGTGATGTGGCGATTGTTTTTAAAAATAGCTATATTATTGGTTATTATGAGAATGTTCAAAGTGGTATAGATG
AGTATAAAATGTATCAAGCTTTAGATATTGAATGA

Protein sequence : 
MIKIENLTKSYRTPTGRHYVFKDLNIEIPSGKSVAFIGRNGAGKSTLLRMIGGIDRPDSGKIITNKTISWPVGLAGGFQG
SLTGRENVKFVARLYAKQEELKEKIEFVEEFAELGKYFDMPIKTYSSGMRSRLGFGLSMAFKFDYYIVDEVTAVGDARFK
EKCAQLFKERHKESSFLMVSHSLNSLKEFCDVAIVFKNSYIIGYYENVQSGIDEYKMYQALDIE

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
kpsT CAE85223.1 KpsT protein Virulence PAI V 536 Protein 4e-72 74
kpsT YP_854396.1 polysialic acid transport ATP-binding protein KpsT Not tested PAI I APEC-O1 Protein 1e-67 73
ctrD NP_273138.1 capsule polysaccharide export ATP-binding protein CtrD Not tested IHT-A Protein 3e-41 43

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
kpsT YP_006107350.1 polysialic acid capsule biosynthesis transport protein KpsT VFG1449 Protein 4e-68 73
kpsT YP_006107350.1 polysialic acid capsule biosynthesis transport protein KpsT VFG0696 Protein 4e-44 45
kpsT YP_006107350.1 polysialic acid capsule biosynthesis transport protein KpsT VFG0258 Protein 1e-41 43
kpsT YP_006107350.1 polysialic acid capsule biosynthesis transport protein KpsT VFG2563 Protein 9e-39 42