Gene Information

Name : ECABU_c33390 (ECABU_c33390)
Accession : YP_006107335.1
Strain : Escherichia coli ABU 83972
Genome accession: NC_017631
Putative virulence/resistance : Virulence
Product : hypothetical protein
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 3399283 - 3400131 bp
Length : 849 bp
Strand : +
Note : -

DNA sequence :
ATGATGTCAGATATCACAATCTCCCGCCCGGAACTGGTCAACGGACATACGGACGTTATCTGCTCAACCAGTATCCGCCA
CATTCTGGCTGTACGAAAGAGTGCGCTGCTGCAAATCGACACACTTATCCGGCAACTGGCAGAAATCTCAGTACTGACAG
AAAGTATTGGAGGTAAAACCGCCCTGGACTGGGCGATGAAACAGGATTTTCGCTGCGGCTGCTGGCTCATGGAGAAACCG
GAAACCGCAATGAAAGCCATCACCCGCAATCTCGATCGCGAAATCTGGCGTGACCTGATGCAACATTCCGGGATGCTGTC
ATTAATGGATGCGCAGGCCCATGATACATGGTACCGCTCACTGGAGTACGATAACTTTCCGGAAATCAGCGAGGCGAATA
TCCTGAGTACGTTTGAACAACTGCACCAGAATAAGGATGACGTGTTTGAGCGAGGTGTGATCAACCTCTTCAGAGGGCTG
AGCTGGAATTACAAAACCAATTGCCCCTGTAAATTTGGCAATAAAATTATCGTCAACAATCTGGTGAGATGGGACCGATG
GGGATTGCATCTTATCACCGGGCAACAGGCAGATCGACTCGCTGACCTGGAAAGAATGCTGCATCTGTTCAGCGGCAAAC
CGATCCCCGACAGCCGGGAAAATATCATCATTCGGCTGGATGATCACATCCGCTCCGTTCAGGGCAAAGCGTGCTATGAA
GATGAGATGTTCAGCATCAGATACTTTAAGAAGGGCTCCGCACACATCACGTTCAGGAAACCAGAACTGGTTGACAGGCT
AAATGACATAATTGCCAGGCACTATCCAAATGTATTAGCAGACAGGTAA

Protein sequence :
MMSDITISRPELVNGHTDVICSTSIRHILAVRKSALLQIDTLIRQLAEISVLTESIGGKTALDWAMKQDFRCGCWLMEKP
ETAMKAITRNLDREIWRDLMQHSGMLSLMDAQAHDTWYRSLEYDNFPEISEANILSTFEQLHQNKDDVFERGVINLFRGL
SWNYKTNCPCKFGNKIIVNNLVRWDRWGLHLITGQQADRLADLERMLHLFSGKPIPDSRENIIIRLDDHIRSVQGKACYE
DEMFSIRYFKKGSAHITFRKPELVDRLNDIIARHYPNVLADR

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
unnamed AAL57572.1 unknown Not tested LEE Protein 2e-121 93
Z1226 NP_286760.1 hypothetical protein Not tested TAI Protein 1e-123 93
z1226 CAD33792.1 Z1226 protein Not tested PAI I 536 Protein 8e-124 93
Z1664 NP_287166.1 hypothetical protein Not tested TAI Protein 1e-123 93
unnamed CAI43906.1 hypothetical protein Not tested LEE Protein 1e-120 92
unnamed CAE85207.1 hypothetical protein Not tested PAI V 536 Protein 2e-120 89
ECO103_3595 YP_003223452.1 hypothetical protein Not tested LEE Protein 1e-119 89
APECO1_3484 YP_854327.1 hypothetical protein Not tested PAI I APEC-O1 Protein 2e-120 89
ORF_49 AAZ04463.1 hypothetical protein Not tested PAI I APEC-O1 Protein 1e-120 89
aec79 AAW51762.1 Aec79 Not tested AGI-3 Protein 8e-121 88
ECO111_3781 YP_003236116.1 hypothetical protein Not tested LEE Protein 4e-119 88
S3207 NP_838489.1 hypothetical protein Not tested SHI-1 Protein 1e-117 87
unnamed AAK00485.1 unknown Not tested SHI-1 Protein 8e-118 87
SF3002 NP_708776.1 hypothetical protein Not tested SHI-1 Protein 1e-117 87
unnamed CAD66210.1 hypothetical protein Not tested PAI III 536 Protein 4e-109 86

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
ECABU_c33390 YP_006107335.1 hypothetical protein VFG1533 Protein 5e-124 93
ECABU_c33390 YP_006107335.1 hypothetical protein VFG0666 Protein 5e-118 87
ECABU_c33390 YP_006107335.1 hypothetical protein VFG1685 Protein 2e-109 86