Gene Information

Name : ECABU_c33360 (ECABU_c33360)
Accession : YP_006107332.1
Strain : Escherichia coli ABU 83972
Genome accession: NC_017631
Putative virulence/resistance : Virulence
Product : hypothetical protein
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 3398125 - 3398502 bp
Length : 378 bp
Strand : +
Note : -

DNA sequence :
ATGAAAACATTACCCGACACACACGTACGGGCGGCATCGCGCTGCCCGTCTCCCGTCACCATCTGGCAGACACTGCTCAC
CCGACTGCTGGACCAGCACTATGGCCTCACGCTGAATGACACACCGTTCGCTGATGAACGTGTGATTGAGCAGCATATTG
AGGCAGGGATTTCACTGTGTGACGCGGTGAACTTTCTCGTTGAAAAATACGCGCAGGTACGTACCGACCAGCCGGGATTC
AGCGCAGGAGCCCCGTCGCAGTTAATCAACAGCATTGATATTCTCCGGGCTCGCAGGGCGACCGGCCTGATGACCCGGAA
CAATTACAGAATGGTAAATAACATTACCCAGGGCAAGCATCCGGAGGCAAAACGATGA

Protein sequence :
MKTLPDTHVRAASRCPSPVTIWQTLLTRLLDQHYGLTLNDTPFADERVIEQHIEAGISLCDAVNFLVEKYAQVRTDQPGF
SAGAPSQLINSIDILRARRATGLMTRNNYRMVNNITQGKHPEAKR

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
yeeV YP_854325.1 hypothetical protein Not tested PAI I APEC-O1 Protein 7e-53 96
yeeV AAZ04461.1 conserved hypothetical protein Not tested PAI I APEC-O1 Protein 6e-52 96
yeeV CAE85204.1 YeeV protein Not tested PAI V 536 Protein 2e-51 93
yeeV NP_838487.1 hypothetical protein Not tested SHI-1 Protein 2e-51 93
unnamed AAK00482.1 unknown Not tested SHI-1 Protein 1e-51 93
yeeV NP_708773.1 hypothetical protein Not tested SHI-1 Protein 2e-51 93
ECO103_3592 YP_003223449.1 hypothetical protein Not tested LEE Protein 1e-50 92
unnamed AAC31486.1 L0007 Not tested LEE Protein 7e-50 92
Z5091 NP_290242.1 hypothetical protein Not tested LEE Protein 9e-50 92
unnamed ACU09433.1 conserved hypothetical protein Not tested LEE Protein 7e-50 92
ECs4539 NP_312566.1 hypothetical protein Not tested LEE Protein 9e-50 92
unnamed AAL57575.1 unknown Not tested LEE Protein 5e-49 91
unnamed CAD66207.1 hypothetical protein Not tested PAI III 536 Protein 2e-49 91
z5091 CAD33789.1 Z5091 protein Not tested PAI I 536 Protein 2e-48 91
unnamed AAL67342.1 intergenic-region protein Not tested PAI II CFT073 Protein 3e-50 91
unnamed CAI43848.1 hypothetical protein Not tested LEE Protein 1e-48 89
aec76 AAW51759.1 Aec76 Not tested AGI-3 Protein 1e-48 89
unnamed AAL67389.1 L0007-like protein Not tested PAI II CFT073 Protein 4e-49 89
yeeV ADD91699.1 YeeV Not tested PAI-I AL862 Protein 4e-48 89
unnamed AAL08478.1 unknown Not tested SRL Protein 2e-48 89
c5149 NP_756997.1 hypothetical protein Not tested PAI II CFT073 Protein 6e-49 89
unnamed CAD42101.1 hypothetical protein Not tested PAI II 536 Protein 1e-48 88

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
ECABU_c33360 YP_006107332.1 hypothetical protein VFG0663 Protein 5e-52 93
ECABU_c33360 YP_006107332.1 hypothetical protein VFG0786 Protein 3e-50 92
ECABU_c33360 YP_006107332.1 hypothetical protein VFG1682 Protein 8e-50 91
ECABU_c33360 YP_006107332.1 hypothetical protein VFG1530 Protein 6e-49 91
ECABU_c33360 YP_006107332.1 hypothetical protein VFG1069 Protein 1e-48 89
ECABU_c33360 YP_006107332.1 hypothetical protein VFG1620 Protein 5e-49 88