Gene Information

Name : ECABU_c32770 (ECABU_c32770)
Accession : YP_006107276.1
Strain : Escherichia coli ABU 83972
Genome accession: NC_017631
Putative virulence/resistance : Unknown
Product : IS2 insertion element transposase InsAB'
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 3340806 - 3341630 bp
Length : 825 bp
Strand : +
Note : -

DNA sequence :
TTGCACGTCATTCTCAGACGAGCCGATGACTGGAAGGACGGCCGCCGCAGCCGTCACACGGATGATACGGATGTGCTTCG
CCGTATACACCATGTTATCGGAGAGCTACCCACATATGGTTATCGTCGGGTATGGGCGCTGCTTCGCAGACAAACAGAAC
TTGATGGTATGCCTGCGATCAATGCCAAACGTATTTACCGGATCATGCGCCAGAATGCGCTGTTGCTTGAGCGAAAAACC
GCTGTACCGCCATCGAAACGGGCACATACCGGCAGAGTGGCTGTGAAAGAAAGTAATCAGCGATGGTGCTCTGACGGGTT
CGAGTTCCGCTGTGATAACGGAGAAAAACTGCGGGTCACGTTCGCGCTGGACTGCTGTGACCGTGAGGCACTGCACTGGG
CGGTCACTACGGGCGGCTTCAACAGTGAAACAGTACAGGACGTCATGCTGGGAGCGGTGGAACGCCGCTTCGGCAACGAG
CTTCCGGCGTCTCCAGTAGAGTGGCTGACGGATAATGGTTCATGCTACCGGGCTAATGAAACACGGCAGTTTGCCCGGAT
GTTGGGGCTTGAACCGAAAAACACGGCGGTGCGGAGTCCGGAGAGTAACGGCATAGCAGAGAGCTTCGTGAAAACGATAA
AGCGTGACTACATAAGTATCATACCCAAACCAGACGGGTTAACGGCAGCAAAGAACCTTGCAGAGGCGTTCGAGCATTAT
AACGAATGGCATCCGCATAGTGCGTTGGGTTATCGCTCGCCACGGGAATATCTGCGGCAGCGGGCCTGTAATGGGTTAAG
TGATAACAGATGTCTGGAAATATAG

Protein sequence :
MHVILRRADDWKDGRRSRHTDDTDVLRRIHHVIGELPTYGYRRVWALLRRQTELDGMPAINAKRIYRIMRQNALLLERKT
AVPPSKRAHTGRVAVKESNQRWCSDGFEFRCDNGEKLRVTFALDCCDREALHWAVTTGGFNSETVQDVMLGAVERRFGNE
LPASPVEWLTDNGSCYRANETRQFARMLGLEPKNTAVRSPESNGIAESFVKTIKRDYISIIPKPDGLTAAKNLAEAFEHY
NEWHPHSALGYRSPREYLRQRACNGLSDNRCLEI

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
unnamed AAL67379.1 transposase-like protein Not tested PAI II CFT073 Protein 4e-119 98
insD YP_002414033.1 insertion element IS2 transposase InsD Not tested Not named Protein 3e-124 97
tnpF AAD44739.1 TnpF Not tested SHI-2 Protein 1e-117 96
unnamed CAC39284.1 hypothetical protein Not tested LPA Protein 4e-118 96
SF2985 NP_708759.1 insertion element IS2 transposase InsD Not tested SHI-1 Protein 2e-116 96
S4050 NP_839218.2 insertion element IS2 transposase InsD Not tested SHI-2 Protein 6e-123 96
SF3708 NP_709447.1 IS2 transposase TnpB Not tested SHI-2 Protein 6e-123 96
SF3721 NP_709460.1 IS2 transposase TnpB Not tested SHI-2 Protein 6e-123 96
S4061 NP_839230.2 insertion element IS2 transposase InsD Not tested SHI-2 Protein 3e-123 96
S3189 NP_838472.2 insertion element IS2 transposase InsD Not tested SHI-1 Protein 5e-122 95
ECO111_3773 YP_003236109.1 putative IS2 transposase InsAB Not tested LEE Protein 3e-120 94
aec49 AAW51732.1 Aec49 Not tested AGI-3 Protein 2e-108 82
unnamed CAC39283.1 hypothetical protein Not tested LPA Protein 1e-77 65
c5197 NP_757045.1 transposase insD Not tested PAI II CFT073 Protein 1e-60 59
insD YP_854263.1 IS2 transposase Not tested PAI I APEC-O1 Protein 9e-61 59
insD AAZ04432.1 IS2 transposase Not tested PAI I APEC-O1 Protein 7e-61 59

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
ECABU_c32770 YP_006107276.1 IS2 insertion element transposase InsAB' VFG1732 Protein 1e-124 97
ECABU_c32770 YP_006107276.1 IS2 insertion element transposase InsAB' VFG0649 Protein 9e-117 96
ECABU_c32770 YP_006107276.1 IS2 insertion element transposase InsAB' VFG0608 Protein 2e-123 96
ECABU_c32770 YP_006107276.1 IS2 insertion element transposase InsAB' VFG0621 Protein 2e-123 96