Gene Information

Name : ECABU_c32690 (ECABU_c32690)
Accession : YP_006107268.1
Strain : Escherichia coli ABU 83972
Genome accession: NC_017631
Putative virulence/resistance : Unknown
Product : integrase core domain-containing protein
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 3335199 - 3335999 bp
Length : 801 bp
Strand : -
Note : -

DNA sequence :
ATGCCACTGCTGGATAAGCTGCGTGAGCAGTACGGGGTCGGACCGGTATGCAGTGAACAGCATATTGCCCCGTCAACGTA
TTACCATTGTCAGCAGCAGCGGCATCATCCTGATAAACGCAGTGCCCGTTGTCAGCGCGATGACTGGCTGAAGAGAGAGA
TACAGCGCGTATACGATGAAAATCATCAGGTGTACGGTGTGCGTAAAGTCTGGCGTCAGTTGTTACGGGAAGGAATCAGG
GTGGCCAGATGTACAGTGGCGCGCCTCATGGCGGTTATGGGACTTGCCGGTGTTCTCCGGGGTAAAAAGGTCCGCACTAC
CGTCAGCCGGAAAACCGTTGCTGCAGGTGACCGCGTAAACCGTCAGTTCGTGGCAGAACGTCCTGACCAGCTGTGGGTGG
CTGATTTTACTTACGTCAGCACATGGCAGGGCTTCGTCTATGTGGCGTTCATCATTGATGTGTTTGCCGGATACATCGTG
GGGTGGTGGGTCTCATCGTCTATGGAAACGACATTCGTGCTGGATGCGCTGGAGCAGGCGTTGTGGGCCCGCCGTCCGTC
CGGCACCATCCATCACAGCGATAAAGGCTCTCAGTATGTGTCACTGGCCTATATGGAGCGATTAAAAGAAGCAAAACTGC
TGGCATCAACAGGGAGTACAGGCGACTCGTATGACAACGCGATGGCGGAGAGCATCAATGGTCTTTACAAAGCGGAGGTA
ATACACCGTAAGAGCTGGAAAAACCGTGCAGAAGTGGAACTGGCCACACTCACGTGGGTGGACTGGTATAACAATCGATG
A

Protein sequence :
MPLLDKLREQYGVGPVCSEQHIAPSTYYHCQQQRHHPDKRSARCQRDDWLKREIQRVYDENHQVYGVRKVWRQLLREGIR
VARCTVARLMAVMGLAGVLRGKKVRTTVSRKTVAAGDRVNRQFVAERPDQLWVADFTYVSTWQGFVYVAFIIDVFAGYIV
GWWVSSSMETTFVLDALEQALWARRPSGTIHHSDKGSQYVSLAYMERLKEAKLLASTGSTGDSYDNAMAESINGLYKAEV
IHRKSWKNRAEVELATLTWVDWYNNR

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
Z1660 NP_287162.1 transposase for IS629 Not tested TAI Protein 4e-118 97
Z1221 NP_286756.1 transposase Not tested TAI Protein 3e-118 97
APECO1_3499 YP_854312.1 transposase for IS629 Not tested PAI I APEC-O1 Protein 2e-118 97
c5178 NP_757026.1 transposase IS629 Not tested PAI II CFT073 Protein 8e-119 97
IS629 CAI43840.1 transposase for IS629 Not tested LEE Protein 4e-115 97
ORF_34 AAZ04444.1 putative IS629 transposase Not tested PAI I APEC-O1 Protein 1e-118 97
c5213 NP_757061.1 transposase IS629 Not tested PAI II CFT073 Protein 7e-119 97
ECO111_3721 YP_003236061.1 putative IS629 transposase OrfB Not tested LEE Protein 5e-119 97
ECO111_3776 YP_003236111.1 putative IS629 transposase OrfB Not tested LEE Protein 5e-119 97
unnamed AAL67406.1 putative transposase Not tested PAI II CFT073 Protein 3e-93 97
Z1638 NP_287141.1 transposase Not tested TAI Protein 8e-118 96
IS629 CAC37926.1 transposase for IS629 Not tested LEE Protein 4e-114 96
IS629 CAI43821.1 transposase for IS629 Not tested LEE Protein 4e-114 96
IS629 CAI43909.1 transposase for IS629 1 Not tested LEE Protein 4e-114 96
ECO103_3585 YP_003223443.1 IS629 transposase OrfB Not tested LEE Protein 5e-114 96
Z1198 NP_286733.1 transposase Not tested TAI Protein 8e-118 96
unnamed CAD42083.1 hypothetical protein Not tested PAI II 536 Protein 2e-116 96
unnamed AAL67398.1 putative transposase Not tested PAI II CFT073 Protein 4e-118 96
c5167 NP_757015.1 transposase IS629 Not tested PAI II CFT073 Protein 1e-96 94
CDCE8392_1774 YP_005134308.1 transposase-like protein Not tested Not named Protein 8e-32 49
tnp7109-25 YP_001800853.1 transposase for insertion sequence Not tested Not named Protein 8e-47 45

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
ECABU_c32690 YP_006107268.1 integrase core domain-containing protein VFG1602 Protein 1e-116 96