Gene Information

Name : ECABU_c32680 (ECABU_c32680)
Accession : YP_006107267.1
Strain : Escherichia coli ABU 83972
Genome accession: NC_017631
Putative virulence/resistance : Virulence
Product : major pilus subunit operon regulatory protein PapI
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 3334327 - 3334548 bp
Length : 222 bp
Strand : +
Note : -

DNA sequence :

ATGAAGAATGAAATACTGGAATTTCTGAACAGGCATAATGGAGGGAAAACCGCAGAAATTGCGGAGGCGCTGGCGGTAAC
GGATTATCAGGCACGCTATTACCTGTTATTACTGGAAAAAGAAGGTGTGGTTCAGCGCTCTCCATTAAGGCGAGGCATGG
CAACATACTGGCTTCTGAAAGGAGAGAAGCAGGCGGGGCAGAACTGTTCTTCCACAACTTAA

Protein sequence :

MKNEILEFLNRHNGGKTAEIAEALAVTDYQARYYLLLLEKEGVVQRSPLRRGMATYWLLKGEKQAGQNCSSTT

• Homologs from PAI DB

Gene	GenBank Accn	Product	Virulance or Resistance	PAI or REI	Alignment Type	E-val	Identity
prfI	CAD42033.1	PrfI protein	Virulence	PAI II 536	Protein	5e-28	96
papI_2	NP_757037.1	PapI protein	Virulence	PAI II CFT073	Protein	1e-27	95
papI	AAL67419.1	PapI	Virulence	PAI II CFT073	Protein	8e-28	95
fooI	AAT48694.1	fimbrial regulatory protein	Virulence	PAI I 4787	Protein	8e-28	95
papI	NP_755468.1	PapI protein	Virulence	PAI I CFT073	Protein	1e-27	94
papI	YP_002414019.1	pap operon regulatory protein PapI	Not tested	Not named	Protein	1e-27	94
sfaC	CAC16949.1	SfaC protein	Virulence	PAI III 536	Protein	5e-26	88
afaF	AAK16195.1	AfaF	Virulence	PAI-I AL862	Protein	4e-10	49
afaF	ADD91749.1	putative transcriptional regulator AfaF-VIII	Not tested	PAI-I AL862	Protein	4e-10	49

• Homologs from VFDB (virulence genes)

Gene	GenBank Accn	Product	ID of source DB	Alignment Type	E-val	Identity
ECABU_c32680	YP_006107267.1	major pilus subunit operon regulatory protein PapI	VFG1552	Protein	2e-28	96
ECABU_c32680	YP_006107267.1	major pilus subunit operon regulatory protein PapI	VFG0891	Protein	3e-28	95
ECABU_c32680	YP_006107267.1	major pilus subunit operon regulatory protein PapI	VFG0880	Protein	3e-28	94
ECABU_c32680	YP_006107267.1	major pilus subunit operon regulatory protein PapI	VFG1640	Protein	2e-26	88