Gene Information

Name : ECABU_c32600 (ECABU_c32600)
Accession : YP_006107259.1
Strain : Escherichia coli ABU 83972
Genome accession: NC_017631
Putative virulence/resistance : Unknown
Product : IS1 protein InsB
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 3330428 - 3330805 bp
Length : 378 bp
Strand : +
Note : -

DNA sequence :
ATGGGCGAACAGTGGGGCTATGTCGGGGCTAAATCGCGCCAGCGCTGGCTGTTTTACGCGTATGACAGGCTCCGGAAGAC
GGTTGTTGCGCACGTATTCGGTGAACGCACGATGGCGACGCTGGGGCGTCTTATGAGCCTGCTGTCACCCTTTGACGTGG
TGATATGGATGACGGATGGCTGGCCGCTGTATGAATCCCGCCTGAAGGGAAAGCTGCACGTAATCAGCAAGCGATATACG
CAGCGAATTGAGCGGCATAACCTGAATCTGAGGCAGCACCTGGCACGGCTGGGACGGAAGTCGCTGTCGTTCTCAAAATC
GGTGGAGCTGCATGACAAAGTCATCGGGCATTATCTGAACATAAAACACTATCAATAA

Protein sequence :
MGEQWGYVGAKSRQRWLFYAYDRLRKTVVAHVFGERTMATLGRLMSLLSPFDVVIWMTDGWPLYESRLKGKLHVISKRYT
QRIERHNLNLRQHLARLGRKSLSFSKSVELHDKVIGHYLNIKHYQ

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
EC042_4085 YP_006098368.1 transposase Not tested Tn2411 Protein 2e-55 99
EC042_4113 YP_006098397.1 transposase Not tested Tn2411 Protein 2e-55 99
insB NP_458736.1 insertion element IS1 protein InsB Not tested SPI-7 Protein 2e-55 99
insB ADD91744.1 transposase Not tested PAI-I AL862 Protein 9e-54 95
Z1192 NP_286727.1 IS1 protein InsB Not tested TAI Protein 2e-53 93
Z1632 NP_287135.1 IS1 protein InsB Not tested TAI Protein 2e-53 93
insB NP_709463.1 IS1 ORF2 Not tested SHI-2 Protein 3e-52 92
tnpH AAD44742.1 TnpH Not tested SHI-2 Protein 1e-52 92
S4059 NP_839227.1 IS1 orfB Not tested SHI-2 Protein 2e-52 92
insB NP_709451.1 IS1 ORF2 Not tested SHI-2 Protein 8e-51 90

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
ECABU_c32600 YP_006107259.1 IS1 protein InsB VFG0612 Protein 2e-51 90