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Name : gabD (ECABU_c29240) Accession : YP_006106941.1 Strain : Escherichia coli ABU 83972 Genome accession: NC_017631 Putative virulence/resistance : Unknown Product : succinate-semialdehyde dehydrogenase I Function : - COG functional category : - COG ID : - EC number : - Position : 2992151 - 2993599 bp Length : 1449 bp Strand : + Note : NADP-dependent activity DNA sequence : ATGAAACTTAACGACAGTAACTTATTCCGCCAGCAGGCGTTGATTAACGGGGAATGGCTGGACGCCAACAATGGCGAGGT CATCGACGTCACCAATCCGGCGAACGGCGACAAGCTGGGTAGCGTGCCGAAAATGGGCGCTGATGAAACCCGCGCCGCTA TCGACGCCGCCAACCGCGCCCTGCCCGTCTGGCGTGCGCTCACTGCCAAAGAACGCGCCAACATTCTGCGCAACTGGTTC AATTTAATGATGGAGCATCAGGACGATTTAGCGCGCCTGATGACCCTCGAACAGGGCAAACCACTGGCTGAAGCGAAAGG CGAAATCAGCTACGCCGCCTCATTTATTGAGTGGTTTGCAGAAGAAGGCAAACGTATTTATGGCGACACCATTCCCGGTC ATCAGGCCGATAAACGCCTGATTGTTATCAAGCAGCCGATTGGCGTCACCGCGGCTATCACGCCGTGGAACTTCCCGGCG GCGATGATTACCCGTAAAGCCGGTCCGGCGCTGGCGGCAGGCTGCACGATGGTGCTGAAGCCCGCCAGTCAGACGCCGTT CTCTGCGCTGGCGCTGGCAGAACTGGCGATTCGCGCGGGCGTTCCGGCTGGCGTGTTTAACGTAGTCACCGGTTCGGCGG GCGCGGTCGGTAACGAACTGACCAGCAACCCGCTGGTGCGCAAGCTGTCGTTTACCGGCTCGACCGAAATTGGCCGTCAG TTAATGGAACAGTGCGCGAAAGACATCAAAAAAGTGTCGCTGGAGCTGGGCGGCAACGCACCGTTTATTGTCTTTGACGA TGCCGATCTCGATAAAGCCGTGGAAGGCGCGCTGGCCTCGAAATTCCGTAACGCCGGGCAAACCTGCGTCTGCGCCAACC GCCTGTATGTGCAGAACGGCGTGTATGACCGCTTTGCCGAAAAATTGCAGCAGGCGGTGAGCAAACTGCACATCGGCAAC GGGCTGGAGAAAGGCGTCACCATCGGGCCGCTGATCGATGAAAAAGCGGTAGCAAAAGTGGAAGAGCATATTGCCGATGC GCTGGAGAAAGGCGCGCGCGTGGTTTGCGGCGGTAAAGCACATGAACGCGGCGGTAACTTCTTCCAGCCGACCATTCTGG TGGACGTTCCGGCTAACGCCAAAGTGTCGAAAGAAGAGACGTTTGGCCCCCTCGCCCCGCTGTTCCGTTTTAAAGATGAA GCCGATGTGATTGCGCAAGCCAATGACACCGAATTTGGCCTTGCAGCCTATTTCTACGCCCGTGATTTAAGCCGCGTCTT CCGCGTGGGCGAAGCACTGGAGTACGGCATCATCGGCATCAACACCGGCATTATTTCCAATGAAGTGGCCCCGTTTGGCG GCATTAAAGCCTCGGGTCTGGGTCGTGAAGGTTCGAAGTATGGCATCGAAGATTACTTAGAAATCAAATATATGTGCATC GGTCTTTAA Protein sequence : MKLNDSNLFRQQALINGEWLDANNGEVIDVTNPANGDKLGSVPKMGADETRAAIDAANRALPVWRALTAKERANILRNWF NLMMEHQDDLARLMTLEQGKPLAEAKGEISYAASFIEWFAEEGKRIYGDTIPGHQADKRLIVIKQPIGVTAAITPWNFPA AMITRKAGPALAAGCTMVLKPASQTPFSALALAELAIRAGVPAGVFNVVTGSAGAVGNELTSNPLVRKLSFTGSTEIGRQ LMEQCAKDIKKVSLELGGNAPFIVFDDADLDKAVEGALASKFRNAGQTCVCANRLYVQNGVYDRFAEKLQQAVSKLHIGN GLEKGVTIGPLIDEKAVAKVEEHIADALEKGARVVCGGKAHERGGNFFQPTILVDVPANAKVSKEETFGPLAPLFRFKDE ADVIAQANDTEFGLAAYFYARDLSRVFRVGEALEYGIIGINTGIISNEVAPFGGIKASGLGREGSKYGIEDYLEIKYMCI GL |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| orf17 | AAO17183.1 | Orf17 | Not tested | tcd island | Protein | 3e-153 | 66 |
