Gene Information

Name : ECABU_c02780 (ECABU_c02780)
Accession : YP_006104416.1
Strain : Escherichia coli ABU 83972
Genome accession: NC_017631
Putative virulence/resistance : Virulence
Product : transcriptional regulator
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 282030 - 282227 bp
Length : 198 bp
Strand : +
Note : AlpA family

DNA sequence :
GTGTTGACTACAACAAGCCACGACAGCGTATTTCTGCGTGCCGATAATTCCCTGATCGACATGAACTATATCACCAGTTT
CACCGGTATGACTGACAAATGGTTTTACAAGTTGATCAGTGAAGGCCATTTCCCTAAACCCATCAAACTGGGGCGCAGCA
GCCGCTGGTACAAAAGAGAAGTGGAGCAGTGGAAGTGA

Protein sequence :
MLTTTSHDSVFLRADNSLIDMNYITSFTGMTDKWFYKLISEGHFPKPIKLGRSSRWYKREVEQWK

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
Z1188 NP_286723.1 hypothetical protein Not tested TAI Protein 3e-25 99
Z1627 NP_287131.1 hypothetical protein Not tested TAI Protein 3e-25 99
unnamed CAD33739.1 hypothetical protein Not tested PAI I 536 Protein 8e-25 94
c5192 NP_757040.1 hypothetical protein Not tested PAI II CFT073 Protein 1e-24 94
rox AAR97599.1 regulator of excision Not tested SHI-1 Protein 3e-14 68
unnamed CAE85187.1 hypothetical protein Not tested PAI V 536 Protein 1e-14 68
S3190 NP_838473.1 hypothetical protein Not tested SHI-1 Protein 4e-14 68
SF2987 NP_708761.1 hypothetical protein Not tested SHI-1 Protein 4e-14 68
ECO103_3577 YP_003223438.1 transcriptional regulator Not tested LEE Protein 2e-14 68

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
ECABU_c02780 YP_006104416.1 transcriptional regulator VFG1480 Protein 3e-25 94
ECABU_c02780 YP_006104416.1 transcriptional regulator VFG0651 Protein 1e-14 68