Gene Information

Name : ECABU_c02500 (ECABU_c02500)
Accession : YP_006104387.1
Strain : Escherichia coli ABU 83972
Genome accession: NC_017631
Putative virulence/resistance : Virulence
Product : hypothetical protein
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 254308 - 255129 bp
Length : 822 bp
Strand : -
Note : -

DNA sequence :
ATGCGATTAGCCAGTTGTTTTGGTTATGCTGCGAACCAGATACGCCGTGACCGTCCACTGACACATGAAGAGCTGATGCA
CCATGTGCCGGGGATTTTCGGGGAAGAGAAACACACGTCCCGAAGCCAGAACTATACGTACATCCCCACCATCACCGTAC
TGGAAAGCCTGCAGCGGGAAGGCTTTCAGCCATTCTTCGCCTGCCAGACCTGTGTGCGCGACCCGGGCCGCCGGGGATAC
ACAAAACACATGCTGCGCCTGCGCCGTAACGGAGAGATAAACGGAGAACATGTCCCTGAAATTATTCTGCTCAACTCTCA
TGACGGTACCTCCAGCTACCAGATGCTGCCGGGTTACTTCAGGTTCGTCTGCCAGAACGGATGCGTCTGTGGTCAGTCTC
TGGGGGAAGTGCGTGTTCCGCACCGGGGAAATGTGGTGGACAGAGTCATTGAAGGGGCTTACGAGGTGGTGGGCGTGTTT
GACCGGATAGAGGAGATGCGTGATGCCATGCAGTCGCTGATTCTGCCGCCACCGGCACGCCAGGCGCTGGCACAGGCGGC
ACTGACTTACCGTTATGGTGACGAACATCGGCCCGTCACCACCGCCGACATTCTGACGCCACGACGCCGGGAGGATTACG
GTAAGGACCTGTGGAGTACTTATCAGACCATCCAGGAGAATATGCTGAAAGGCGGGATTTCCGGTCGCAGTGCAAAAGGA
AAACGTATCCACACCCGTGCCATTCACAGCATCGACACCGATATTAAGCTCAACCGCGCATTGTGGGTAATGGCAGAAAC
GCTGCTGGAGAGCCAGCGCTGA

Protein sequence :
MRLASCFGYAANQIRRDRPLTHEELMHHVPGIFGEEKHTSRSQNYTYIPTITVLESLQREGFQPFFACQTCVRDPGRRGY
TKHMLRLRRNGEINGEHVPEIILLNSHDGTSSYQMLPGYFRFVCQNGCVCGQSLGEVRVPHRGNVVDRVIEGAYEVVGVF
DRIEEMRDAMQSLILPPPARQALAQAALTYRYGDEHRPVTTADILTPRRREDYGKDLWSTYQTIQENMLKGGISGRSAKG
KRIHTRAIHSIDTDIKLNRALWVMAETLLESQR

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
unnamed CAI43843.1 hypothetical protein Not tested LEE Protein 1e-114 97
aec71 AAW51754.1 Aec71 Not tested AGI-3 Protein 1e-114 97
yafZ ADD91704.1 YafZ Not tested PAI-I AL862 Protein 1e-114 97
S3199 NP_838482.1 hypothetical protein Not tested SHI-1 Protein 1e-114 96
SF2994 NP_708768.1 hypothetical protein Not tested SHI-1 Protein 1e-114 96
ECO103_3587 YP_003223444.1 hypothetical protein Not tested LEE Protein 1e-113 95
unnamed CAD66201.1 hypothetical protein Not tested PAI III 536 Protein 3e-112 93
c5156 NP_757004.1 hypothetical protein Not tested PAI II CFT073 Protein 4e-110 91
yafZ YP_854321.1 hypothetical protein Not tested PAI I APEC-O1 Protein 3e-110 91
ORF_47 AAZ04456.1 conserved hypothetical protein Not tested PAI I APEC-O1 Protein 2e-110 91
Z1215 NP_286750.1 hypothetical protein Not tested TAI Protein 3e-108 90
Z1655 NP_287158.1 hypothetical protein Not tested TAI Protein 3e-108 90
z1215 CAD33785.1 Z1215 protein Not tested PAI I 536 Protein 4e-106 88
yafZ CAE85199.1 YafZ protein Not tested PAI V 536 Protein 4e-107 87
unnamed CAD42096.1 hypothetical protein Not tested PAI II 536 Protein 1e-104 87
ORF SG86 AAN62307.1 conserved hypothetical protein Not tested PAGI-3(SG) Protein 4e-70 53
ORF C80 AAN62174.1 conserved hypothetical protein; associated with oriT region on plasmids Not tested PAGI-2(C) Protein 2e-70 50

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
ECABU_c02500 YP_006104387.1 hypothetical protein VFG0658 Protein 5e-115 96
ECABU_c02500 YP_006104387.1 hypothetical protein VFG1676 Protein 2e-112 93
ECABU_c02500 YP_006104387.1 hypothetical protein VFG1526 Protein 2e-106 88
ECABU_c02500 YP_006104387.1 hypothetical protein VFG1615 Protein 7e-105 87