Gene Information

Name : ECABU_c02420 (ECABU_c02420)
Accession : YP_006104381.1
Strain : Escherichia coli ABU 83972
Genome accession: NC_017631
Putative virulence/resistance : Virulence
Product : YagB/YeeU/YfjZ family protein
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 251633 - 252007 bp
Length : 375 bp
Strand : -
Note : -

DNA sequence :
GTGTCAGACACGCTCCATGAAACAAATTATCCCGACGACAACAACGACCGCCCCTGGTGGGGGCTACCCTGCACCGTGAC
GCCCTGTTTCGGGGCACGTCTGGTGCAGGAGGGCAATCAGTTGCATTACCTTGCCGACCGCGCCGGTATCAGAGGGCAGT
TCAGCGACGCGGATGCATACCATCTGGACCAGGCTTTTCCACTGCTGATGAAACAACTGGAACTCATGCTCACCATCGGT
GAACTGAATCCCCGCCATCAGCATACCGTCACGCTGTATGCCAGAGGGCTGACCTGCGAAGCCGACACCCTCGGCAGCTG
TGGTTACGTTTATATGGCTGTTTATCCGACACTGGCACCCGCAACCACCTCATAA

Protein sequence :
MSDTLHETNYPDDNNDRPWWGLPCTVTPCFGARLVQEGNQLHYLADRAGIRGQFSDADAYHLDQAFPLLMKQLELMLTIG
ELNPRHQHTVTLYARGLTCEADTLGSCGYVYMAVYPTLAPATTS

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
unnamed AAL67343.1 intergenic-region protein Not tested PAI II CFT073 Protein 9e-55 99
ECO103_3591 YP_003223448.1 hypothetical protein Not tested LEE Protein 2e-53 98
yeeU CAD42100.1 hypothetical protein Not tested PAI II 536 Protein 3e-48 93
yeeU ADD91700.1 YeeU Not tested PAI-I AL862 Protein 1e-47 91
yeeU YP_853121.1 antitoxin of the YeeV-YeeU toxin-antitoxin system Virulence PAI IV APEC-O1 Protein 4e-47 90
aec75 AAW51758.1 Aec75 Not tested AGI-3 Protein 1e-47 89
unnamed CAD66206.1 hypothetical protein Not tested PAI III 536 Protein 4e-46 89
c5150 NP_756998.1 hypothetical protein Not tested PAI II CFT073 Protein 9e-47 89
yeeU CAE85203.1 YeeU protein Not tested PAI V 536 Protein 6e-47 89
Z1220 NP_286755.1 structural protein Not tested TAI Protein 4e-47 88
Z1658 NP_287161.1 structural protein Not tested TAI Protein 4e-47 88
yeeU NP_708772.1 structural protein Not tested SHI-1 Protein 3e-48 88
yeeU NP_838486.1 structural protein Not tested SHI-1 Protein 3e-48 88
unnamed AAK00481.1 unknown Not tested SHI-1 Protein 5e-48 87
unnamed CAI43903.1 hypothetical protein Not tested LEE Protein 3e-45 87
yeeU YP_854324.1 hypothetical protein Not tested PAI I APEC-O1 Protein 2e-48 86
yeeU AAZ04460.1 conserved hypothetical protein Not tested PAI I APEC-O1 Protein 1e-48 86
unnamed AAL08477.1 unknown Not tested SRL Protein 1e-46 85
unnamed AAL57576.1 unknown Not tested LEE Protein 5e-45 85

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
ECABU_c02420 YP_006104381.1 YagB/YeeU/YfjZ family protein VFG1619 Protein 1e-48 93
ECABU_c02420 YP_006104381.1 YagB/YeeU/YfjZ family protein VFG1681 Protein 2e-46 89
ECABU_c02420 YP_006104381.1 YagB/YeeU/YfjZ family protein VFG0662 Protein 8e-49 88
ECABU_c02420 YP_006104381.1 YagB/YeeU/YfjZ family protein VFG1068 Protein 4e-47 85