Gene Information

Name : ECABU_c23130 (ECABU_c23130)
Accession : YP_006106363.1
Strain : Escherichia coli ABU 83972
Genome accession: NC_017631
Putative virulence/resistance : Unknown
Product : putative transposase
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 2319417 - 2320196 bp
Length : 780 bp
Strand : -
Note : -

DNA sequence :
ATGATGGAACTGCAACATCAACGACTGATGGCGCTCGCCGGGCAGTTGCAACTGGAAAGCCTTATAAGCGCAGCGCCTGC
GCTGTCACAACAGGCAGTAGACCAGGAATGGAGTTATATGGACTTCCTGGAGCATCTGCTTCATGAAGAAAAACTGGCAC
GTCATCAACGTAAACAGGCGATGTATACCCGAATGGCAGCCTTCCCGGCGGTGAAAACGTTCGAAGAGTATGACTTCACA
TTCGCCACCGGAGCACCGCAGAAGCAACTCCAGTCGTTACGCTCACTCAGCTTCATAGAACGTAATGAAAATATCGTATT
ACTGGGGCCATCAGGTGTGGGGAAAACCCATCTGGCAATAGCGATGGGCTATGAAGCCGTCCGTGCAGGTATCAAAGTTC
GCTTCACAACAGCAGCAGATCTGTTACTTCAGTTATCTACGGAACAACGTCAGGGCCGTTATAAAACGACGCTTCAGCGT
GGAGTAATGGCCCCCCGCCTGCTCATCATTGATGAAATAGGCTATCTGCCGTTCAGTCAGGAAGAAGCAAAACTGTTCTT
CCAGGTCATTGCTAAACGTTACGAAAAGAGCGCAATGATCCTGACATCCAATCTGCCGTTCGGGCAGTGGGATCAAACGT
TCGCCGGTGATGCAGCACTGACCTCAGCGATGCTGGACCGTATCTTACACCACTCACATGTCGTTCAAATCAAAGGAGAA
AGCTATCGACTCAGACAGAAACGAAAAGCCGGGGTTATAGCAGAAGCTAATCCTGAGTAA

Protein sequence :
MMELQHQRLMALAGQLQLESLISAAPALSQQAVDQEWSYMDFLEHLLHEEKLARHQRKQAMYTRMAAFPAVKTFEEYDFT
FATGAPQKQLQSLRSLSFIERNENIVLLGPSGVGKTHLAIAMGYEAVRAGIKVRFTTAADLLLQLSTEQRQGRYKTTLQR
GVMAPRLLIIDEIGYLPFSQEEAKLFFQVIAKRYEKSAMILTSNLPFGQWDQTFAGDAALTSAMLDRILHHSHVVQIKGE
SYRLRQKRKAGVIAEANPE

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
y1093 CAC43411.1 IS100 transposase; transposase ORFA Not tested PAI III 536 Protein 3e-120 99
y1093 CAD66188.1 transposase Orf B, insertion element IS100 Not tested PAI III 536 Protein 2e-119 99
unnamed CAB46598.1 IS100 transposase Not tested HPI Protein 3e-120 99
s0036 CAD33774.1 ORF B protein Not tested PAI I 536 Protein 3e-120 99
YPTB1586 YP_070114.1 transposase/IS protein Not tested HPI Protein 4e-120 99
y1093 CAD42087.1 OrfB protein of IS100 transposase Not tested PAI II 536 Protein 3e-120 99
unnamed CAA21402.1 - Not tested HPI Protein 4e-120 99
orfB CAE85183.1 OrfB protein, transposase, IS100 Not tested PAI V 536 Protein 3e-120 99
api84 CAF28558.1 putative transposase Not tested YAPI Protein 3e-120 99
aec58 AAW51741.1 Aec58 Not tested AGI-3 Protein 4e-120 99
YPO1901 YP_002346891.1 transposase/IS protein Not tested HPI Protein 3e-120 99
y2410 NP_669717.1 transposase/IS protein Not tested HPI Protein 3e-120 99
y1094 CAD33719.1 ORF B protein Not tested PAI I 536 Protein 7e-86 99

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
ECABU_c23130 YP_006106363.1 putative transposase VFG1627 Protein 2e-120 99
ECABU_c23130 YP_006106363.1 putative transposase VFG1606 Protein 2e-120 99
ECABU_c23130 YP_006106363.1 putative transposase VFG1663 Protein 1e-119 99
ECABU_c23130 YP_006106363.1 putative transposase VFG1515 Protein 2e-120 99
ECABU_c23130 YP_006106363.1 putative transposase VFG1460 Protein 4e-86 99