Gene Information

Name : ECABU_c23120 (ECABU_c23120)
Accession : YP_006106362.1
Strain : Escherichia coli ABU 83972
Genome accession: NC_017631
Putative virulence/resistance : Virulence
Product : hypothetical protein
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 2317789 - 2318391 bp
Length : 603 bp
Strand : +
Note : -

DNA sequence : 
ATGAAACAACAGTATCAGACCCGTTACGAGCTGCTCCATGAAAACTACCAGAAATGGCTGACCGGCTTCACCCGGCACGC
CGTATCATGGGGCGTGTGTCATCCGAATATCTACTATTTCCATAATCTGACGCCCGGGTGGGTGTCATTCAATGGCGAAA
AACCGGAGATTGCCATCGTTCCCCAGAGTCTGCACCGGCTGATTTATGGTCCGGACAAACGGAGCTCCCCGTCCCTGGAT
GATGATCTGGTGGTGAATTTATGCACCAGCGAACACCTGCTGATTCATCATCCGATGCTGGAAGGGATCCTGCTGTCTGA
ATGTGAGCGCCTGAAGCAACATTCTCTGGCAAACAAACTGATCAGCCTCTTCCGTCAGTTTGGCGGCACGGAGTTACGTC
TCAAACTGGTCTGGCTCTGCTGGCTTGACTTAATGACCGGAAACAGCCTTGACGACTGGACGAAAAACCTGAAACACAAA
TCAGAAAAAGATCTGGAGCAATGGATCATTGCACGTCAGGGTCAGAGTGAACCACTGACAAATCTGATGGATCAGTACGT
GCTTATGGCATACCGTACATCGGTTGATGCCGCTCACAGTTGA

Protein sequence : 
MKQQYQTRYELLHENYQKWLTGFTRHAVSWGVCHPNIYYFHNLTPGWVSFNGEKPEIAIVPQSLHRLIYGPDKRSSPSLD
DDLVVNLCTSEHLLIHHPMLEGILLSECERLKQHSLANKLISLFRQFGGTELRLKLVWLCWLDLMTGNSLDDWTKNLKHK
SEKDLEQWIIARQGQSEPLTNLMDQYVLMAYRTSVDAAHS

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
APECO1_1087 YP_853107.1 hypothetical protein Not tested PAI IV APEC-O1 Protein 4e-91 99
unnamed ADD91711.1 putative acyl-CoA dehydrogenase Not tested PAI-I AL862 Protein 1e-85 88
ECO103_3578 YP_003223439.1 hypothetical protein Not tested LEE Protein 5e-86 88
unnamed CAI43836.1 hypothetical protein Not tested LEE Protein 8e-87 88
unnamed AAL08467.1 unknown Not tested SRL Protein 5e-85 87
aec62 AAW51745.1 Aec62 Not tested AGI-3 Protein 4e-70 86
unnamed CAE85188.1 hypothetical protein Not tested PAI V 536 Protein 4e-84 86

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
ECABU_c23120 YP_006106362.1 hypothetical protein VFG1058 Protein 2e-85 87