Gene Information

Name : ECABU_c23080 (ECABU_c23080)
Accession : YP_006106358.1
Strain : Escherichia coli ABU 83972
Genome accession: NC_017631
Putative virulence/resistance : Virulence
Product : hypothetical protein
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 2313948 - 2314517 bp
Length : 570 bp
Strand : -
Note : -

DNA sequence : 
ATGACCTACAAATACAACCCCTTCTGGCAGCAACGTATTCGTGAGACAGTGCGGCACGCACTGAATGTTCATCCCCGCCT
GACGGCATTGCGGGTTGACCTGCGTTTCCCGGATGTACCGGCAGCAACGGACGCAGCTGTGATATCCCGCTTCATCAATG
CCCTGAAAGCCCGAATCGACGCTTACCAGAAACGTAAGCATCGGGAAGGTAAACGCGTGCATCCCACCACTCTGCATTAC
GTCTGGGCCCGGGAGTTTGGGGAGTGCAAAGGTAAAAAACACTATCATCTGATGCTGCTGGTCAACCGGGATACCTGGTG
TCGTGCCGGTGATTACCGCGCTCCGGGATCACTGGCCGGAATGATTGAACAGGCCTGGTGCAGTGCCCTGGGGGTGGATG
CCGGATGCCATGCCACGCTGGTGCATTTTCCGGCCTGGCCGGCGGTGTGGCTGGCGCGTAATGATGACACCGGCTTTCAG
CAAGTGCTGGAACGTGCTGACTATCTGGCGAAGGAGCATACCAAAGCTCACTGCACCGGTGAGCGCAACTTTGGCTGCAG
TCGTGGCTGA

Protein sequence : 
MTYKYNPFWQQRIRETVRHALNVHPRLTALRVDLRFPDVPAATDAAVISRFINALKARIDAYQKRKHREGKRVHPTTLHY
VWAREFGECKGKKHYHLMLLVNRDTWCRAGDYRAPGSLAGMIEQAWCSALGVDAGCHATLVHFPAWPAVWLARNDDTGFQ
QVLERADYLAKEHTKAHCTGERNFGCSRG

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
unnamed AAL08464.2 unknown Not tested SRL Protein 2e-85 98
APECO1_1084 YP_853104.1 hypothetical protein Not tested PAI IV APEC-O1 Protein 4e-86 98
ECO103_3573 YP_003223434.1 hypothetical protein Not tested LEE Protein 1e-81 94
unnamed ADD91714.1 hypothetical protein Not tested PAI-I AL862 Protein 7e-82 94
unnamed AAW51744.1 Aec61 Not tested AGI-3 Protein 2e-81 93
unnamed CAI43834.1 hypothetical protein Not tested LEE Protein 1e-79 91
unnamed CAD42091.1 hypothetical protein Not tested PAI II 536 Protein 4e-35 41

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
ECABU_c23080 YP_006106358.1 hypothetical protein VFG1055 Protein 7e-86 98
ECABU_c23080 YP_006106358.1 hypothetical protein VFG1610 Protein 1e-35 41