Gene Information

Name : ECABU_c23060 (ECABU_c23060)
Accession : YP_006106356.1
Strain : Escherichia coli ABU 83972
Genome accession: NC_017631
Putative virulence/resistance : Virulence
Product : hypothetical protein
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 2312983 - 2313393 bp
Length : 411 bp
Strand : -
Note : -

DNA sequence : 
ATGCGAATTCTGAACTGTTATATGGCGAATGACAGCAAAGGCCATTTTGTTACGGCGAAAGAAGCAGCGAAGCACAACCG
CCAGGACGTTTTGTGCTGTGTGTCCTGTGGATGCCCGTTAACACTTCAGCGGGGCAATGACGGACAACCACCGTGGTTTG
AACATGACCAGATGACTGTCGCTGAGAAAATCCTGCTGCGATGCACCTGGCTTGACCCGGCAGAGAAAGAGGCCCGTCGT
TTGCATCTGCAGGGTATGACGGTTCCGGATTATACGGTGAAGGTGAGAAAGTGGTTTTGTGTGATGTGTGACGAAGATTA
TGAAGGAGAAAAGTGCTGCCCGCGTTGTGGTACCGGGGTATACAGCAGGGAGGGGGGGCTGCAGGAAGGCAACTGGAAGG
ATAGGAACTGA

Protein sequence : 
MRILNCYMANDSKGHFVTAKEAAKHNRQDVLCCVSCGCPLTLQRGNDGQPPWFEHDQMTVAEKILLRCTWLDPAEKEARR
LHLQGMTVPDYTVKVRKWFCVMCDEDYEGEKCCPRCGTGVYSREGGLQEGNWKDRN

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
unnamed AAL08463.1 unknown Not tested SRL Protein 5e-56 99
APECO1_1082 YP_853102.1 hypothetical protein Not tested PAI IV APEC-O1 Protein 6e-59 98
unnamed ADD91716.1 hypothetical protein Not tested PAI-I AL862 Protein 7e-54 97
unnamed CAI43832.1 hypothetical protein Not tested LEE Protein 3e-54 97

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
ECABU_c23060 YP_006106356.1 hypothetical protein VFG1054 Protein 2e-56 99