Gene Information

Name : ECABU_c12420 (ECABU_c12420)
Accession : YP_006105337.1
Strain : Escherichia coli ABU 83972
Genome accession: NC_017631
Putative virulence/resistance : Virulence
Product : YagB/YeeU/YfjZ family protein
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 1261950 - 1262324 bp
Length : 375 bp
Strand : +
Note : -

DNA sequence :
GTGTCAGACACGCTCCATGAAACAAATTATCCCGACGACAACAACGACCGCCCCTGGTGGGGGCTACCCTGCACCGTGAC
GCCCTGTTTCGGGGCACGTCTGGTGCAGGAGGGCAATCAGTTGCATTACCTTGCCGACCGCGCCGGTATCAGAGGGCAGT
TCAGCGACGCGGATGCATACCATCTGGACCAGGCTTTTCCACTGCTGATGAAACAACTGGAACTCATGCTCACCAGCGGT
GAACTGAATCCCCGCCATCAGCATACCGTCACGCTGTATGCCAGAGGGCTGACCTGCGAAGCCGACACCCTCGGCAGCTG
TGGTTACGTTTATATGGCTGTTTATCCGACACTGGCACCCGCAACCACCTCATAA

Protein sequence :
MSDTLHETNYPDDNNDRPWWGLPCTVTPCFGARLVQEGNQLHYLADRAGIRGQFSDADAYHLDQAFPLLMKQLELMLTSG
ELNPRHQHTVTLYARGLTCEADTLGSCGYVYMAVYPTLAPATTS

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
ECO103_3591 YP_003223448.1 hypothetical protein Not tested LEE Protein 8e-54 99
unnamed AAL67343.1 intergenic-region protein Not tested PAI II CFT073 Protein 3e-54 99
yeeU CAD42100.1 hypothetical protein Not tested PAI II 536 Protein 1e-48 94
yeeU ADD91700.1 YeeU Not tested PAI-I AL862 Protein 7e-48 92
yeeU YP_853121.1 antitoxin of the YeeV-YeeU toxin-antitoxin system Virulence PAI IV APEC-O1 Protein 2e-47 91
aec75 AAW51758.1 Aec75 Not tested AGI-3 Protein 7e-48 90
unnamed CAD66206.1 hypothetical protein Not tested PAI III 536 Protein 2e-46 90
c5150 NP_756998.1 hypothetical protein Not tested PAI II CFT073 Protein 4e-47 90
yeeU CAE85203.1 YeeU protein Not tested PAI V 536 Protein 3e-47 90
Z1220 NP_286755.1 structural protein Not tested TAI Protein 2e-47 88
Z1658 NP_287161.1 structural protein Not tested TAI Protein 2e-47 88
yeeU NP_838486.1 structural protein Not tested SHI-1 Protein 1e-48 88
yeeU NP_708772.1 structural protein Not tested SHI-1 Protein 1e-48 88
unnamed CAI43903.1 hypothetical protein Not tested LEE Protein 1e-45 88
unnamed AAK00481.1 unknown Not tested SHI-1 Protein 2e-48 87
yeeU YP_854324.1 hypothetical protein Not tested PAI I APEC-O1 Protein 8e-49 87
yeeU AAZ04460.1 conserved hypothetical protein Not tested PAI I APEC-O1 Protein 5e-49 87
unnamed AAL08477.1 unknown Not tested SRL Protein 5e-47 86
unnamed AAL57576.1 unknown Not tested LEE Protein 2e-45 86

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
ECABU_c12420 YP_006105337.1 YagB/YeeU/YfjZ family protein VFG1619 Protein 6e-49 94
ECABU_c12420 YP_006105337.1 YagB/YeeU/YfjZ family protein VFG1681 Protein 8e-47 90
ECABU_c12420 YP_006105337.1 YagB/YeeU/YfjZ family protein VFG0662 Protein 3e-49 88
ECABU_c12420 YP_006105337.1 YagB/YeeU/YfjZ family protein VFG1068 Protein 2e-47 86