Gene Information

Name : gpU (ECOK1_0967)
Accession : YP_006100185.1
Strain : Escherichia coli IHE3034
Genome accession: NC_017628
Putative virulence/resistance : Unknown
Product : phage protein gpU
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 996622 - 997101 bp
Length : 480 bp
Strand : +
Note : identified by match to protein family HMM PF06995

DNA sequence :
ATGATGCTCGCGTTAGGTATGTTTGTTTTTATGCGCCAGACGCTGCCACACCAGACCATGCAGCGTGAATCAGATTATCG
CTGGCCGTCAAATTCCCGTATCGGTAAACGGGATGCCTACCAGTTTCTCGGCGTTGGTGAGGAAAACATGACGCTTGCCG
GTGTGCTTTATCCCGAACTGACCGGCGGCAAGCTGACGATGACCACGCTCAGACTGATGGCAGAGGAAGGCCGGGCGTGG
CCGTTGCTGGATGGTACCGGCATGATTTACGGCATGTATGTCATCAGCAGGGTGAGTGAAACAGGGAGTATTTTCTTTGC
AGACGGCACACCCCGGAAAATTGATTTTACGCTGTCGCTCACCCGCGTTGATGAATCACTGGCCGCGCTTTATGGCGATA
TCAGTAAACAGGCGGAGTCGCTCATCGGTAAGGCTGGCAGTATGGCGACCAGATTCACAGGTATGACGGGGGCGGGATAA

Protein sequence :
MMLALGMFVFMRQTLPHQTMQRESDYRWPSNSRIGKRDAYQFLGVGEENMTLAGVLYPELTGGKLTMTTLRLMAEEGRAW
PLLDGTGMIYGMYVISRVSETGSIFFADGTPRKIDFTLSLTRVDESLAALYGDISKQAESLIGKAGSMATRFTGMTGAG

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
unnamed ABR13489.1 phage-related tail protein Not tested PAGI-6 Protein 3e-34 51
STY4602 NP_458685.1 putative phage tail protein Not tested SPI-7 Protein 4e-34 46
t4296 NP_807893.1 phage tail protein Not tested SPI-7 Protein 4e-34 46