Gene Information

Name : ECOK1_0831 (ECOK1_0831)
Accession : YP_006100053.1
Strain : Escherichia coli IHE3034
Genome accession: NC_017628
Putative virulence/resistance : Unknown
Product : peptide/opine/nickel uptake (PepT) family ABC transporter, ATP-binding protein
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 865411 - 867282 bp
Length : 1872 bp
Strand : +
Note : identified by match to protein family HMM PF00005; match to protein family HMM PF08352

DNA sequence :
TTGCCACACAGTGATGAACTTGATGCCGGTGATGTGCTGGCGGTTGAAAATCTGAATATTGCCTTTATGCAGGAGCAGCA
CAAAATAGCTGCGGTCCGCAATCTCTCTTTTAGCCTGCAACGTGGTGAGACGCTGGCAATTGTTGGCGAATCCGGCTCCG
GTAAGTCAGTGACTGCGCTGGCATTGATGCGCCTGTTGGAACAGGCGGGCGGTTTAGTGCAGTGCGATAAAATGCTGTTG
CAGCGGCGCAGTCGCGAAGTAATTGAACTTAGCGAGCAGAGTGCTGCACAAATGCGCCATGTGCGCGGGGCGGATATGGC
GATGATATTTCAGGAGCCGATGACATCGCTGAACCCGGTATTTACTGTGGGTGAACAGATTGCTGAATCTATTCGTCTGC
ATCAGAACGCCAGTCGTGAAGAAGCGATGGTCGAGGCGAAGCGGATGCTGGATCAGGTACGCATTCCGGAGGCACAAACC
ATTCTTTCACGTTATCCGCATCAACTCTCTGGCGGGATGCGCCAGCGAGTGATGATTGCGATGGCGCTGTCATGCCGCCC
GGCGGTGCTGATTGCCGATGAGCCAACCACCGCGTTGGATGTCACTATTCAGGCGCAGATCCTGCAATTAATCAAAGTAT
TGCAAAAAGAGATGTCGATGGGCGTTATCTTTATCACTCACGATATGGGCGTGGTGGCAGAGATTGCCGATCGGGTACTG
GTGATGTATCAGGGCGAGGCGGTGGAAACGGGTAGCGTCGAACAGATTTTTCATGCACCGCAACATCCTTATACCCGTGC
GCTGTTAGCTGCTGTTCCGCAACTTGGTGCGATGAAAGGGTTAGATTATCCCCGACGTTTCCCATTGATATCGCTTGAAC
ATCCAGCGAAACAGGAGCCACCCATCGAGCAGAAAACGGTGGTGGATGGCGAACCTGTTTTACGGGTGCGTAATCTGGTC
TCCCGTTTCCCTTTGCGCAGCGGTTTGTTGAATCGCGTAACGCGGGAAGTGCATGCCGTTGAGAAAGTCAGTTTTGATCT
CTGGCCTGGTGAAACGCTATCGCTGGTGGGCGAGTCTGGCAGCGGTAAATCCACCACCGGGCGGGCGTTGCTGCGCCTGG
TCGAATCGCAGGGCGGCGAAATTATCTTTAACGGTCAGCGAATCGATACCTTGTCACCCGGTAAACTTCAGGCATTGCGC
CGCGATATTCAGTTTATTTTTCAGGACCCTTACGCTTCGCTGGACCCACGTCAGACCATCGGTGATTCGATTCTCGAACC
GCTGCGCGTACACGGTTTATTGCCAGGTAAAGAAGCGGCTGCACGCGTTGCGTGGTTGCTGGAGCGCGTGGGCCTGTTAC
CGGAACATGCCTGGCGTTACCCACATGAGTTTTCCGGCGGTCAGCGCCAGCGCATCTGCATTGCTCGCGCGTTGGCATTG
AATCCAAAAGTGATCATTGCCGACGAAGCCGTTTCGGCGCTGGATGTTTCTATTCGCGGGCAGATTATCAACTTGTTGCT
CGATCTCCAGCGTGATTTCGGCATTGCGTATCTGTTTATCTCCCACGATATGGCCGTGGTTGAGCGGATTAGTCATCGTG
TGGCGGTGATGTATCTCGGGCAAATTGTTGAAATTGGTCCACGGCGCGCGGTCTTTGAAAATCCGCAGCATCCTTATACG
CGTAAATTACTGGCGGCAGTTCCGGTCGCTGAACCGTCCCGACAACGACCGCAGCGTGTACTGCTGTCGGACGATCTTCC
CAGCAATATTCATCTGCGTGGCGAAGAGGTTGCAGCCGTCTCGTTGCAATGCGTCGGGCCGGGGCATTACGTTGCACAAC
CACAATCAGAATACGCATTCATGCGTAGATAA

Protein sequence :
MPHSDELDAGDVLAVENLNIAFMQEQHKIAAVRNLSFSLQRGETLAIVGESGSGKSVTALALMRLLEQAGGLVQCDKMLL
QRRSREVIELSEQSAAQMRHVRGADMAMIFQEPMTSLNPVFTVGEQIAESIRLHQNASREEAMVEAKRMLDQVRIPEAQT
ILSRYPHQLSGGMRQRVMIAMALSCRPAVLIADEPTTALDVTIQAQILQLIKVLQKEMSMGVIFITHDMGVVAEIADRVL
VMYQGEAVETGSVEQIFHAPQHPYTRALLAAVPQLGAMKGLDYPRRFPLISLEHPAKQEPPIEQKTVVDGEPVLRVRNLV
SRFPLRSGLLNRVTREVHAVEKVSFDLWPGETLSLVGESGSGKSTTGRALLRLVESQGGEIIFNGQRIDTLSPGKLQALR
RDIQFIFQDPYASLDPRQTIGDSILEPLRVHGLLPGKEAAARVAWLLERVGLLPEHAWRYPHEFSGGQRQRICIARALAL
NPKVIIADEAVSALDVSIRGQIINLLLDLQRDFGIAYLFISHDMAVVERISHRVAVMYLGQIVEIGPRRAVFENPQHPYT
RKLLAAVPVAEPSRQRPQRVLLSDDLPSNIHLRGEEVAAVSLQCVGPGHYVAQPQSEYAFMRR

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
dppD YP_005160017.1 putative peptide ABC transport system ATP-binding protein Not tested Not named Protein 2e-97 41