Gene Information

Name : kdpA (ECOK1_0707)
Accession : YP_006099937.1
Strain : Escherichia coli IHE3034
Genome accession: NC_017628
Putative virulence/resistance : Unknown
Product : K+-transporting ATPase, A subunit
Function : -
COG functional category : -
COG ID : -
EC number : 3.6.3.12
Position : 745733 - 747406 bp
Length : 1674 bp
Strand : -
Note : identified by similarity to SP:P03959; match to protein family HMM PF03814; match to protein family HMM TIGR00680

DNA sequence :
ATGGCTGCGCAAGGGTTCTTACTGATTGCCACGTTTTTACTGGTATTTATGGTGCTGGCGCGTCCCTTAGGTAGCGGGCT
GGCGCGGCTGATTAATGATATACCTCTTCCTGGTACGACGGGCGTTGAACGCGTACTCTTTAGCGCGCTTGGCGTCTCTG
ACCGCGAGATGAACTGGAAGCAGTATCTCTCAGCCATTCTTGGCCTGAATATACTGGGGCTGGCGGTGCTGTTTTTTATG
TTGCTCGGTCAGCACTATCTGCCGCTTAATCCACAGCAGTTGCCGGGGCTGTCGTGGGATCTGGCGCTCAATACCGCCGT
CAGCTTTGTCACGAATACCAACTGGCAATCTTATAGCGGTGAAACCACGTTGAGCTATTTCAGCCAGATGGCGGGCTTAA
CGGTGCAAAACTTTCTTTCTGCCGCCAGCGGGATTGCGGTGATTTTTGCGCTTATTCGCGCGTTTACCCGCCAGAGCATG
AACACGCTGGGTAATGCGTGGGTAGACCTGTTGCGGATTACGTTATGGGTGTTAACCCCCGTAGCATTGCTGATCGCACT
GTTTTTTATTCAACAAGGTGCGCTGCAAAACTTTTTGCCTTATCAGGCTGTGACGACCATTGAAGGAGCGCAACAGCTGT
TACCAATGGGGCCAGTAGCTTCTCAGGAAGCGATCAAAATGCTCGGAACTAACGGCGGTGGCTTTTTTAATGCCAACTCG
TCGCATCCGTTTGAAAACCCAACCGCACTGACCAACTTCGTGCAAATGCTGGCGATTTTCTTGATCCCAACAGCGCTGTG
CTTTGCCTTTGGTGAAGTGGCGGGCGATCGTCGCCAGGGGCGCATGTTGCTGTGGGCGATGTCGGTGATTTTTGTCATCT
GCGTAGGCGTAGTGATGTGGGCAGAAGTTCAGGGTAATCCTCATCTGCTGGCGCTCGGCGCGGACAGCAGCATCAATATG
GAAGGTAAAGAGAGCCGTTTCGGCGTGCTGGTCAGTAGCCTGTTTGCGGTCGTGACTACGGCGGCTTCCTGCGGCGCGGT
GATTGCGATGCATGATTCGTTTACCGCTCTTGGTGGCATGGTGCCGATGTGGTTGATGCAAATTGGTGAAGTGGTATTCG
GCGGCGTCGGTTCCGGCCTTTACGGCATGATGCTGTTTGTCCTGCTGGCGGTGTTTATTGCCGGGCTGATGATTGGTCGT
ACACCGGAATATCTGGGTAAAAAAATCGACGTACGCGAGATGAAACTGACTGCACTGGCGATTCTGGTCACCCCGACGCT
GGTGCTGATGGGCGCGGCGCTGGCAATGATGACCGACGCCGGACGTAGCGCCATGCTCAACCCTGGCCCGCATGGTTTTA
GCGAAGTGCTGTATGCCGTGTCATCCGCCGCTAACAACAACGGCAGCGCCTTTGCCGGATTAAGCGCCAACTCTCCATTC
TGGAACTGTTTACTGGCGTTGTGCATGTTTGTCGGGCGCTTCGGGGTGATTATCCCGGTGATGGCAATTGCCGGTTCGCT
GGTGAGTAAAAAGAGCCAACCCGCCAGCTCCGGCACATTGCCAACGCACGGCCCGCTGTTTGTTGGCCTGTTAATCGGCA
CCGTGTTGCTGGTTGGCGCACTGACCTTTATCCCTGCCCTGGCGCTTGGTCCGGTGGCGGAATATCTCTCCTGA

Protein sequence :
MAAQGFLLIATFLLVFMVLARPLGSGLARLINDIPLPGTTGVERVLFSALGVSDREMNWKQYLSAILGLNILGLAVLFFM
LLGQHYLPLNPQQLPGLSWDLALNTAVSFVTNTNWQSYSGETTLSYFSQMAGLTVQNFLSAASGIAVIFALIRAFTRQSM
NTLGNAWVDLLRITLWVLTPVALLIALFFIQQGALQNFLPYQAVTTIEGAQQLLPMGPVASQEAIKMLGTNGGGFFNANS
SHPFENPTALTNFVQMLAIFLIPTALCFAFGEVAGDRRQGRMLLWAMSVIFVICVGVVMWAEVQGNPHLLALGADSSINM
EGKESRFGVLVSSLFAVVTTAASCGAVIAMHDSFTALGGMVPMWLMQIGEVVFGGVGSGLYGMMLFVLLAVFIAGLMIGR
TPEYLGKKIDVREMKLTALAILVTPTLVLMGAALAMMTDAGRSAMLNPGPHGFSEVLYAVSSAANNNGSAFAGLSANSPF
WNCLLALCMFVGRFGVIIPVMAIAGSLVSKKSQPASSGTLPTHGPLFVGLLIGTVLLVGALTFIPALALGPVAEYLS

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
kdpA NP_814333.1 potassium-transporting ATPase subunit A Not tested Not named Protein 7e-86 51
ef0087 AAM75290.1 EF0087 Not tested Not named Protein 5e-86 51
SAR0070 YP_039538.1 potassium-transporting ATPase subunit A Not tested Type-II SCCmec Protein 5e-70 43
truncated-kdpA NP_370596.1 potassium-transporting ATPase subunit A Not tested Type-II SCCmec Protein 5e-70 43
kdpA NP_373308.2 potassium-transporting ATPase subunit A Not tested Type-II SCCmec Protein 5e-70 43
kdpA YP_190030.1 potassium-transporting ATPase subunit A Not tested Type-II SCCmec Protein 5e-70 43
kdpA YP_251948.1 potassium-transporting ATPase subunit A Not tested SCCmec Protein 6e-71 43
unnamed BAB43902.1 potassium-transporting ATPase(A chain) Not tested Type-II SCCmec Protein 4e-70 43