Gene Information

Name : ECOK1_0615 (ECOK1_0615)
Accession : YP_006099854.1
Strain : Escherichia coli IHE3034
Genome accession: NC_017628
Putative virulence/resistance : Virulence
Product : IbrA protein
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 655887 - 657107 bp
Length : 1221 bp
Strand : -
Note : identified by similarity to GB:AAM53133.1; match to protein family HMM PF01507

DNA sequence : 
ATGTCTATTTATAAAATCCCGCTTCCACTGAATATTCTGGAAGCTGCAAAAGAACGTATTACCTGGACACTTAATACCCT
ACCCCGTATCTGTGTTTCTTTTTCGGGTGGTAAAGATTCCGGATTAATGCTGCATCTGACAGCTGAAATTGCCCGACAAA
TGGGCAAAAAAATCTGCGTTTTGTTTATCGACTGGGAAGCGCAGTTCTCATGCACTATTAACTATGTTCAGTCATTACGT
GAGTTTTACGCCGATGTCATCGAAGAGTTTTACTGGGTTGCGCTCCCGCTTACGACGCAAAATTCCCTTTCTCAATACCA
ACCCGAATGGCAGTGCTGGGAACCTGATGTCGAATGGGTGCGTCAGCCCCCGCAAGATGCGATAACCGATCCTGACTTTT
TCTCCTTTTACCAGCCTGGTATGACCTTCGAACAATTTGTGCGTGAGTTTGCCGAATGGTTTTCGCAAAAGCGTCCGGCG
GCGATGATGATCGGCATCCGTGCAGATGAGTCCTACAACCGTTTTGTCGCCATCGCCAGTTTAAATAAACAACGTTTTGC
CGATGATAAACCCTGGACCACCGCCGCACCAGGCGGTCATAGCTGGTACATTTACCCCATCTACGACTGGAAAGTGGCTG
ATATCTGGACCTGGTATGCTAACCATCAACAGCTCTGTAACCCACTGTATAATATAATGTATCAGGCAGGCGTTCCTCTG
CGTCATATGCGAATTTGCGAACCTTTTGGCCCGGAGCAACGGCAAGGATTATGGCTCTATCACGTTATCGAACCGGATCG
CTGGGCTGCTATGTGCGCACGAGTCAGCGGGGTAAAAAGTGGCGGCATTTACGCCGGACATGATAATCATTTTTATGGTC
ATCGGAAAATCCTCAAGCCAGAACATTTAGACTGGCAAGAATATGCATTATTGCTGCTCAATAGCATGCCGGAAAAAACA
GCTGAGCATTACCGCAATAAAATCGCCATTTATTTGCACTGGTATCAGAAAAAAGGCATCGAAGTTCCACAAACCCAGCA
AGGGGACATTGGCGCGAAAGATATCCCCTCCTGGCGGCGAATATGCAAAGTTTTACTCAATAACGATTACTGGTGCCGGG
CATTATCATTTAGTCCTACGAAAGCGAAGAACTATCAGCGTTATAACGAACGGATAAAAGGAAAACGTCAGGAATGGGGG
ATACTATGCAACAACGATTAA

Protein sequence : 
MSIYKIPLPLNILEAAKERITWTLNTLPRICVSFSGGKDSGLMLHLTAEIARQMGKKICVLFIDWEAQFSCTINYVQSLR
EFYADVIEEFYWVALPLTTQNSLSQYQPEWQCWEPDVEWVRQPPQDAITDPDFFSFYQPGMTFEQFVREFAEWFSQKRPA
AMMIGIRADESYNRFVAIASLNKQRFADDKPWTTAAPGGHSWYIYPIYDWKVADIWTWYANHQQLCNPLYNIMYQAGVPL
RHMRICEPFGPEQRQGLWLYHVIEPDRWAAMCARVSGVKSGGIYAGHDNHFYGHRKILKPEHLDWQEYALLLLNSMPEKT
AEHYRNKIAIYLHWYQKKGIEVPQTQQGDIGAKDIPSWRRICKVLLNNDYWCRALSFSPTKAKNYQRYNERIKGKRQEWG
ILCNND

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
z1203 CAD33763.1 Z1203 protein Not tested PAI I 536 Protein 1e-124 59
ibrA ADD91735.1 putative phosphoadenosine phosphosulfate reductase IbrA Not tested PAI-I AL862 Protein 1e-123 59
Z1643 AAQ19139.1 putative phosphoadenosine phosphosulfate reductase Not tested PAI I CL3 Protein 4e-124 59
Z1203 NP_286738.1 hypothetical protein Not tested TAI Protein 1e-123 58
ORF_31 AAZ04441.1 conserved hypothetical protein Not tested PAI I APEC-O1 Protein 5e-125 58
Z1643 NP_287146.1 hypothetical protein Not tested TAI Protein 1e-123 58
APECO1_3502 YP_854308.1 hypothetical protein Not tested PAI I APEC-O1 Protein 7e-125 58
c5209 NP_757057.1 hypothetical protein Not tested PAI II CFT073 Protein 7e-125 58
STY4583 NP_458667.1 conserved hypothetical protein Not tested SPI-7 Protein 2e-124 58
t4277 NP_807875.1 hypothetical protein Not tested SPI-7 Protein 9e-125 58

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
ECOK1_0615 YP_006099854.1 IbrA protein VFG1504 Protein 5e-125 59