Gene Information

Name : ECOK1_0614 (ECOK1_0614)
Accession : YP_006099853.1
Strain : Escherichia coli IHE3034
Genome accession: NC_017628
Putative virulence/resistance : Virulence
Product : IbrB protein
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 655285 - 655902 bp
Length : 618 bp
Strand : -
Note : identified by similarity to GB:AAM53134.1; match to protein family HMM PF02195

DNA sequence :
ATGCAACAACGATTAACGCAGGATTTAACCCAATTTCTCGCCAGCTTGCCGGAAGATGATCGCATCAAAGCGATTAATGA
AATCCGCATGGCGATCCATCAGGTTAGCCCCTTTCGTGAAGAGCCAGTGGATTGCGTTCTGTGGGTTAAAAACAGCCAAC
TTATGCCTAATGATTACAACCCAAACAACGTGGCACCACCCGAAAAAAAACTGCTGAAAAAATCCATTGAAATAGATGGT
TTTACCCAACCCATTGTGGTCACGCATACGGATAAAAATGCTCTGGAAATCGTGGATGGTTTTCACCGCCATGAAATTGG
TAAAGGCTCATCATCGTTAAAATTACGCTTAAAAGGTTATTTGCCGGTGACCTGTCTGGAAGGTACGCGTAATCAACGCA
TCGCCGCGACTATTCGTCATAATCGCGCTCGTGGACGTCACCAAATCACTGCCATGTCAGAAATCGTCCGAGAACTCAGC
CAGTTGGGATGGGACGATAATAAAATAGGCAAAGAGCTGGGAATGGACAGCGACGAAGTGTTACGCCTGAAGCAAATTAA
CGGCCTGCAAGAGTTGTTTGCCGACCGTCAATTTTCCCGCGCCTGGACGGTTAAATAA

Protein sequence :
MQQRLTQDLTQFLASLPEDDRIKAINEIRMAIHQVSPFREEPVDCVLWVKNSQLMPNDYNPNNVAPPEKKLLKKSIEIDG
FTQPIVVTHTDKNALEIVDGFHRHEIGKGSSSLKLRLKGYLPVTCLEGTRNQRIAATIRHNRARGRHQITAMSEIVRELS
QLGWDDNKIGKELGMDSDEVLRLKQINGLQELFADRQFSRAWTVK

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
Z1204 NP_286739.1 hypothetical protein Not tested TAI Protein 1e-56 60
Z1644 NP_287147.1 hypothetical protein Not tested TAI Protein 1e-56 60
Z1644 AAQ19140.1 putative ParB-like nuclease Not tested PAI I CL3 Protein 1e-56 60
ibrB ADD91736.1 predicted transcriptional regulator IbrB Not tested PAI-I AL862 Protein 1e-56 60
STY4584 NP_458668.1 conserved hypothetical protein Not tested SPI-7 Protein 8e-55 58
z1204 CAD33764.1 Z1204 protein Not tested PAI I 536 Protein 5e-56 58
t4278 NP_807876.2 hypothetical protein Not tested SPI-7 Protein 7e-55 58
ORF_30 AAZ04440.1 conserved hypothetical protein Not tested PAI I APEC-O1 Protein 2e-43 56
APECO1_3503 YP_854305.1 hypothetical protein Not tested PAI I APEC-O1 Protein 3e-43 56
c5208 NP_757056.1 hypothetical protein Not tested PAI II CFT073 Protein 3e-43 56
ef0120 AAM75321.1 EF0120 Not tested Not named Protein 2e-31 53
EF0607 NP_814365.1 ParB-like nuclease domain-containing protein Not tested Not named Protein 2e-31 53
M5005_Spy_0164 YP_281528.1 parB-like nuclease Not tested Not named Protein 2e-30 53

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
ECOK1_0614 YP_006099853.1 IbrB protein VFG1505 Protein 2e-56 58