|
Name : deoA (ECOK1_4948) Accession : YP_006103990.1 Strain : Escherichia coli IHE3034 Genome accession: NC_017628 Putative virulence/resistance : Unknown Product : thymidine phosphorylase Function : - COG functional category : - COG ID : - EC number : 2.4.2.4 Position : 5084565 - 5085887 bp Length : 1323 bp Strand : + Note : identified by similarity to SP:P07650; match to protein family HMM PF00591; match to protein family HMM PF02885; match to protein family HMM PF07831; match to protein family HMM TIGR02643; match to protein family HMM TIGR02644 DNA sequence : TTGTTTCTCGCACAAGAAATTATTCGTAAAAAACGTGATGGTCATGCGCTGAGTGATGAAGAAATTCGTTTCTTTATCAA CGGCATTCGCGACAACACTATCTCCGAAGGGCAGATTGCCGCCCTCGCGATGACCATTTTCTTCCACGATATGACAATGC CTGAGCGTGTCTCGCTGACCATGGCGATGCGAGATTCAGGAACCGTTCTCGACTGGAAAAGCCTGCATCTGAATGGCCCG ATTGTTGATAAACACTCGACCGGCGGTGTCGGCGATGTGACTTCGCTGATGTTGGGGCCGATGGTCGCTGCCTGTGGCGG CTATATTCCGATGATCTCCGGTCGCGGCCTCGGTCATACTGGCGGTACGCTCGACAAACTGGAATCCATCCCTGGCTTCG ACATTTTCCCGGATGACAACCGTTTCCGCGAAATTATTAAAGACGTCGGCGTGGCGATTATCGGCCAGACCAGCTCACTG GCTCCGGCGGATAAACGTTTCTACGCGACCCGCGATATTACCGCAACCGTGGATTCAATCCCGCTGATCACCGCCTCTAT TCTGGCGAAGAAACTGGCGGAAGGTCTGGACGCGCTGGTGATGGACGTGAAAGTGGGTAGCGGCGCGTTTATGCCGACCT ACGAACTCTCTGAAGCCCTTGCCGAAGCGATTGTTGGCGTGGCTAACGGCGCTGGCGTGCGCACCACCGCGCTGCTCACC GATATGAATCAGGTACTGGCCTCCAGTGCAGGTAACGCGGTTGAAGTTCGTGAAGCGGTGCAGTTCCTGACGGGTGAATA TCGTAACCCGCGTCTGTTTGATGTCACGATGGCACTGTGCGTGGAGATGCTGATCTCCGGCAAACTGGCGAAAAATGACG CCGAAGCGCGCGCGAAATTGCAGGCGGTGCTGGACAACGGTAAAGCGGCAGAAGTCTTTGGTCGTATGGTCGCGGCACAA AAAGGCCCGACCGACTTCGTTGAGAACTACGCGAAGTATCTGCCGACAGCGATGCTGACGAAAGCAGTCTATGCTGATAC CGAAGGGTTTGTCAGTGAAATGGATACCCGCGCACTGGGGATGACAGTGGTTGCAATGGGCGGCGGACGCCGTCAGGCAT CTGACACCATCGATTACAGCGTCGGCTTTACTGATATGGCGCGTCTGGGCGACCAGGTAGACGGTCAGCGTCCGCTGGCA GTTATCCACGCGAAAGACGAAAACAGCTGGCAGGAAGCGGCGAAAGCGGTGAAAGCGGCAATTAAACTTGCCGATAAAGC ACCGGAAAGCACACCAACTGTCTATCGCCGTATCAGCGAATAA Protein sequence : MFLAQEIIRKKRDGHALSDEEIRFFINGIRDNTISEGQIAALAMTIFFHDMTMPERVSLTMAMRDSGTVLDWKSLHLNGP IVDKHSTGGVGDVTSLMLGPMVAACGGYIPMISGRGLGHTGGTLDKLESIPGFDIFPDDNRFREIIKDVGVAIIGQTSSL APADKRFYATRDITATVDSIPLITASILAKKLAEGLDALVMDVKVGSGAFMPTYELSEALAEAIVGVANGAGVRTTALLT DMNQVLASSAGNAVEVREAVQFLTGEYRNPRLFDVTMALCVEMLISGKLAKNDAEARAKLQAVLDNGKAAEVFGRMVAAQ KGPTDFVENYAKYLPTAMLTKAVYADTEGFVSEMDTRALGMTVVAMGGGRRQASDTIDYSVGFTDMARLGDQVDGQRPLA VIHAKDENSWQEAAKAVKAAIKLADKAPESTPTVYRRISE |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| deoA | YP_005163381.1 | Thymidine phosphorylase | Not tested | Not named | Protein | 2e-67 | 45 |
