Gene Information

Name : ECOK1_0484 (ECOK1_0484)
Accession : YP_006099725.1
Strain : Escherichia coli IHE3034
Genome accession: NC_017628
Putative virulence/resistance : Resistance
Product : ABC transporter ATP-binding protein
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 527001 - 527687 bp
Length : 687 bp
Strand : +
Note : identified by match to protein family HMM PF00005

DNA sequence : 
ATGCCAGCGGAAAACATTGTTGAAGTTCATCATCTTAAGAAGTCCGTCGGTCAGGGGGAGCATGAACTCTCCATCCTCAC
CGGAGTTGAGCTGGTTGTCAAACGTGGCGAGACCATCGCACTGGTGGGCGAGTCGGGATCGGGTAAGTCAACCTTGCTGG
CGATCCTCGCCGGGCTGGATGACGGCAGCAGTGGCGAAGTGAGACTGGTGGGACAACCGCTACATAATATGGACGAAGAA
GCGCGGGCAAAGTTGCGCGCGAAGCACGTAGGCTTTGTTTTTCAGTCATTTATGTTAATTCCTACCCTTAACGCGCTGGA
AAACGTCGAGCTTCCGGCGCTGCTGCGCGGTGAGAGTAGCGCAGAAAGTCGTAACGGGGCGAAAGCGTTGCTCGAACAGT
TAGGGTTGTGTAAACGTCTTGATCATCTTCCGGCACAGCTTTCTGGCGGCGAACAGCAACGAGTGGCGCTGGCGCGAGCC
TTTAATGGTCGACCTGATGTGCTGTTTGCCGACGAACCCACCGGCAACCTTGACCGCCAGACGGGCGATAAAATTGCCGA
TCTACTTTTTTCCCTCAACCGTGAGCATGGCACCACGTTGATTATGGTGACCCATGACCTGCAACTGGCGGCACGCTGTG
ACCGCTGCTTACGGCTGGTGAACGGGCAGTTGCAGGAGGAAGCATGA

Protein sequence : 
MPAENIVEVHHLKKSVGQGEHELSILTGVELVVKRGETIALVGESGSGKSTLLAILAGLDDGSSGEVRLVGQPLHNMDEE
ARAKLRAKHVGFVFQSFMLIPTLNALENVELPALLRGESSAESRNGAKALLEQLGLCKRLDHLPAQLSGGEQQRVALARA
FNGRPDVLFADEPTGNLDRQTGDKIADLLFSLNREHGTTLIMVTHDLQLAARCDRCLRLVNGQLQEEA

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
Cp1002_1464 YP_005681730.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 1e-33 45
CpC231_1466 YP_005683828.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 1e-33 44
cpfrc_01473 YP_003783873.1 hypothetical protein Not tested PiCp 5 Protein 1e-33 44
CpI19_1473 YP_005685914.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 1e-33 44

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
ECOK1_0484 YP_006099725.1 ABC transporter ATP-binding protein NC_012469.1.7686878. Protein 8e-40 44
ECOK1_0484 YP_006099725.1 ABC transporter ATP-binding protein NC_008702.1.4606598. Protein 3e-34 44
ECOK1_0484 YP_006099725.1 ABC transporter ATP-binding protein CP001581.1.gene798.p Protein 2e-36 41