Gene Information

Name : argF (ECOK1_4766)
Accession : YP_006103819.1
Strain : Escherichia coli IHE3034
Genome accession: NC_017628
Putative virulence/resistance : Unknown
Product : ornithine carbamoyltransferase
Function : -
COG functional category : -
COG ID : -
EC number : 2.1.3.3
Position : 4906028 - 4907032 bp
Length : 1005 bp
Strand : -
Note : identified by match to protein family HMM PF00185; match to protein family HMM PF02729; match to protein family HMM TIGR00658

DNA sequence :
ATGGCTACTTCACTGAAAAACCGTAATTTTCTTAAGCTGCTTGATTACACCCCAGCAGAGATTCAATACCTGATTGATTT
GGCTATCAATCTTAAAGCCGCCAAGAAATCTGGAAACGAAAAACAAACGCTGGTCGGTAAAAACATTGCGTTGATTTTTG
AAAAATCCTCTACCCGTACCCGCTGTGCCTTTGAAGTCGCGGCCTTTGATCAAGGTGCGCAGGTGACTTACATCGGCCCC
AGCGGCTCACAAATCGGCCATAAAGAATCAATGAAAGATACCGCTCGCGTACTCGGACGCATGTATGACGGTATTGAGTA
TCGCGGTTATGGTCAGAATATCGTTGAAGAATTAGGTGAGTTCGCTGGTGTTCCGGTATGGAACGGACTGACCAATGAAT
TTCACCCGACACAGATCCTCGCGGATTTAATGACCATGCTGGAACATGCGCCAGGCAAAACGCTGCCAGAGCTGAGCTTT
GCGTATCTTGGTGATGCCCGAAATAACATGGGGAACTCGCTGATGGTTGGTGCTGCAAAAATGGGGATGGATATCCGTCT
GGTGGCACCAAAATCTTTCTGGCCAGATGAAGCGCTGGTAACACAATGCCGTGAGATCGCCAGCGTGACTGGGGCGAGAA
TCACCCTGACAGAGGATGTGGAAGAAGGCGTATACGACGTTGATTTTCTCTATACGGATGTTTGGGTTTCGATGGGAGAG
CCAAAAGAAGCCTGGGCAGAACGAGTGAGTCTTATGACACCTTATCAGATCAATCAACAGGTGATTACTGCCACGCGTAA
CCCTGAAGTCAAATTTATGCACTGCCTGCCCGCCTTCCATAATGAGCACACCACAGTAGGACGCGAGATCGAGATGGCCT
ACGGCCTCAAAGGACTGGAAGTAACTGATGAGGTTTTTGAATCTGCCCACTCCATTGTTTTCGATGAAGCAGAAAACCGG
ATGCACACCATTAAAGCGGTGATGGTAGCAACTCTCGGCGACTAA

Protein sequence :
MATSLKNRNFLKLLDYTPAEIQYLIDLAINLKAAKKSGNEKQTLVGKNIALIFEKSSTRTRCAFEVAAFDQGAQVTYIGP
SGSQIGHKESMKDTARVLGRMYDGIEYRGYGQNIVEELGEFAGVPVWNGLTNEFHPTQILADLMTMLEHAPGKTLPELSF
AYLGDARNNMGNSLMVGAAKMGMDIRLVAPKSFWPDEALVTQCREIASVTGARITLTEDVEEGVYDVDFLYTDVWVSMGE
PKEAWAERVSLMTPYQINQQVITATRNPEVKFMHCLPAFHNEHTTVGREIEMAYGLKGLEVTDEVFESAHSIVFDEAENR
MHTIKAVMVATLGD

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
arcB1 YP_186044.1 ornithine carbamoyltransferase Not tested vSa¥ã Protein 2e-98 59
argF YP_493760.1 ornithine carbamoyltransferase Not tested vSa¥ã Protein 2e-98 59
argF NP_645867.1 ornithine carbamoyltransferase Not tested vSa¥ã Protein 5e-98 59
argF NP_371693.1 ornithine carbamoyltransferase Not tested vSa¥ã Protein 4e-98 59
argF NP_374285.1 ornithine carbamoyltransferase Not tested vSa¥ã Protein 4e-98 59
SAKOR_01090 YP_008491278.1 Ornithine carbamoyltransferase Not tested vSa¥ã Protein 3e-98 59
SE0103 NP_763658.1 ornithine carbamoyltransferase Not tested SCCpbp4 Protein 7e-99 58